RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 PRR7Q8TB68 274 aa7.98□□□□□ -1.13
CACNA1A-242ENST00000637485 TMEM141Q96I45 108 aa7.98□□□□□ -1.13
CACNA1A-242ENST00000637485 C9JQL5 133 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 SLC25A16P16260 332 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 CSRP2Q16527 193 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 A0A1B0GUS0 222 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 INS-IGF2F8WCM5 200 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 FOXH1O75593 365 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 INSP01308 110 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 SPATA31B1PQ5VZV4 182 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 AMTNQ6UX39 209 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 PLXNA3P51805 1871 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 SAP30O75446 220 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 IGHV3-23P01764 117 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 RFPL3SP0C7P2 107 aa7.97□□□□□ -1.13
CACNA1A-242ENST00000637485 IGKV1D-43A0A0B4J1Z2 117 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 NMSQ5H8A3 153 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 LYPD1Q8N2G4 141 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 PNRC2Q9NPJ4 139 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 ZNF492Q9P255 531 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 ASCC3Q8N3C0 2202 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 C9orf172C9J069 976 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 G3V4G9 280 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 SH2D1AO60880 128 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 PRSS57Q6UWY2 283 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 TMEM171Q8WVE6 324 aa7.96□□□□□ -1.13
CACNA1A-242ENST00000637485 PRSS29PA6NIE9 313 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 ATP5G1P05496 136 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 GFI1Q99684 422 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 THSD7BQ9C0I4 1608 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 K7ERJ3 54 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 IGHG3P01860 377 aa7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 PAQR4Q8N4S7 273 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-242ENST00000637485 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 HGFACQ04756 655 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 DPM3Q9P2X0 92 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 UNC13CQ8NB66 2214 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 Q8N8P6 123 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 A0A1B0GX51 115 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 ZNRF1Q8ND25 227 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 TMEM167AQ8TBQ9 72 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 CHCHD5Q9BSY4 110 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 SBF1O95248 1867 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 C6orf226Q5I0X4 101 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 CLEC19AQ6UXS0 136 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 ZNF497Q6ZNH5 498 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 PRDM6Q9NQX0 595 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 MAP1BP46821 2468 aaKnown RBP7.95□□□□□ -1.14
CACNA1A-242ENST00000637485 FOXG1P55316 489 aaPredicted RBP7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 ATP1A1-AS1Q5TC04 95 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 LIME1Q9H400 295 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 S4R3C0 116 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 DOCK4Q8N1I0 1966 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 SAA2-SAA4A0A096LPE2 208 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 SAA2P0DJI9 122 aaPredicted RBP7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 MYOD1P15172 320 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 VDAC2P45880 294 aaPredicted RBP7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 SH2D6Q7Z4S9 175 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 REPIN1Q9BWE0 567 aaKnown RBP7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 A0A0B4J2C4 111 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 FOXI2Q6ZQN5 318 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 C17orf82Q86X59 251 aaPredicted RBP7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 DTX1Q86Y01 620 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 FDCSPQ8NFU4 85 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 LINC00312Q9Y6C7 94 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 SCN5AQ14524 2016 aa7.94□□□□□ -1.14
CACNA1A-242ENST00000637485 ZFP36L1Q07352 338 aaKnown RBP7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 DTX2Q86UW9 622 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 ITLN2Q8WWU7 325 aaPredicted RBP7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 TRGV9Q99603 122 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 KNTC1P50748 2209 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 F6UB75 175 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 IGHG2P01859 326 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 COA6Q5JTJ3 125 aaKnown RBP7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 A0A0A6YYD4 124 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 NBL1P41271 181 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 ERCC8Q13216 396 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 FAM104BQ5XKR9 115 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 IGKV2-40A0A087WW87 121 aaPredicted RBP7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 B9A039 149 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 IGKV2D-40P01614 121 aaPredicted RBP7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 CFC1P0CG37 223 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 PRR31Q5SQ13 230 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 ZNF329Q86UD4 541 aa7.93□□□□□ -1.14
CACNA1A-242ENST00000637485 CFHR1Q03591 330 aa7.92□□□□□ -1.14
CACNA1A-242ENST00000637485 Q8NFD4 153 aa7.92□□□□□ -1.14
CACNA1A-242ENST00000637485 ATP6V0E2Q8NHE4 81 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms