RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 C5orf47Q569G3 176 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 SAMD5Q5TGI4 173 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 NRGNQ92686 78 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 CTHRC1Q96CG8 243 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 ZNF883P0CG24 379 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 MST1P26927 711 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 IFI27L1Q96BM0 104 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 MTURNQ8N3F0 131 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 IGHV3-30P01768 117 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 IGHV3-33P01772 117 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 IGHV3-30-3P0DP02 117 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 IGHV3-30-5P0DP03 117 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 ZNRF2Q8NHG8 242 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 TRAV9-2A0A087WT02 112 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 SCN4AP35499 1836 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 DTX1Q86Y01 620 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 NR2C2APQ86WQ0 139 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 TIMM21Q9BVV7 248 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 GTSF1LQ9H1H1 148 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 DIDO1Q9BTC0 2240 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 CMC4P56277 68 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 VWCEQ96DN2 955 aa14.55□□□□□ -0.08
CACNA1A-227ENST00000636549 COL4A1P02462 1669 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 TIMP3P35625 211 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 TMEM158Q8WZ71 300 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 C1QTNF4Q9BXJ3 329 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 MARF1Q9Y4F3 1742 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 E7EQL1 145 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 ATP6V0E1O15342 81 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 FAM120AOSQ5T036 256 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 C18orf12Q96KH6 178 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 DUTP33316 252 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 APOC4P55056 127 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 RBM38Q9H0Z9 239 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 A0A087X0K7 114 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 DEFB4AO15263 64 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 DOCK6Q96HP0 2047 aa14.54□□□□□ -0.08
CACNA1A-227ENST00000636549 MPDZO75970 2070 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 TNFSF13O75888 250 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 SRP19P09132 144 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 CFHR2P36980 270 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 HAMPP81172 84 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 DLEC1Q9Y238 1755 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 TINCRA0A1B0GVN0 87 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 MRPL14Q6P1L8 145 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 XCL1P47992 114 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 ZNF479Q96JC4 524 aa14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 TNS1Q9HBL0 1735 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-227ENST00000636549 TMEM238C9JI98 176 aa14.52□□□□□ -0.08
CACNA1A-227ENST00000636549 A0A0A6YYD4 124 aa14.52□□□□□ -0.08
CACNA1A-227ENST00000636549 TRBV25-1A0A075B6N4 114 aa14.52□□□□□ -0.08
CACNA1A-227ENST00000636549 HGFACQ04756 655 aa14.52□□□□□ -0.08
CACNA1A-227ENST00000636549 TCF15Q12870 199 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 SMDT1Q9H4I9 107 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 TM2D1Q9BX74 207 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 CACNA1GO43497 2377 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 GAFA1Q96PS6 74 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 SMIM2Q9BVW6 85 aa14.52□□□□□ -0.09
CACNA1A-227ENST00000636549 EIF4EBP2Q13542 120 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 MMP23AO75900 390 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 IGLV10-54A0A075B6I4 117 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 MST1LQ2TV78 715 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 NOP10Q9NPE3 64 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 TMEM242Q9NWH2 141 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 F2Z2F3 143 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 Q6AWC8 147 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 WFDC1Q9HC57 220 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 SPRY2O43597 315 aa14.51□□□□□ -0.09
CACNA1A-227ENST00000636549 TCTEX1D4Q5JR98 221 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 ZNF581Q9P0T4 197 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 IGKV1D-8A0A087WSZ0 117 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 MGST2Q99735 147 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 WISP3O95389 354 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 C5orf64Q2M2E5 130 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 WFDC11Q8NEX6 87 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 IGHG3P01860 377 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 F8W735 103 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 AMN1Q8IY45 258 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 SCN5AQ14524 2016 aa14.5□□□□□ -0.09
CACNA1A-227ENST00000636549 IGKV1D-12P01611 117 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 TRBV6-7A0A0A0MS04 114 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 NPDC1Q9NQX5 325 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 STRCP1A6NGW2 1772 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 SPINK8P0C7L1 97 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 IGLV3-21P80748 117 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 CABIN1Q9Y6J0 2220 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 H0YJW9 148 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 MORN5Q5VZ52 161 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 APRG1Q8IVJ8 170 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 A0A1W2PRE2 83 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 CCL20P78556 96 aa14.49□□□□□ -0.09
CACNA1A-227ENST00000636549 SUPT4H1P63272 117 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-227ENST00000636549 RPP25LQ8N5L8 163 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-227ENST00000636549 C5orf63A6NC05 138 aa14.48□□□□□ -0.09
CACNA1A-227ENST00000636549 VCYO14598 125 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 GUSBP1Q15486 140 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 FAM223BA6NKX1 122 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 PSG3Q16557 428 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 FAM90A2PQ658T7 463 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 FAM223AQ8IWN6 122 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms