RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 C9JQL5 133 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 IGHV3-48P01763 117 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 PFN1P07737 140 aaKnown RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 UBE2AP49459 152 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 DMKNQ6E0U4 476 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 SMIM20Q8N5G0 67 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 FIZ1Q96SL8 496 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 B4DSR2 109 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 LMO1P25800 156 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 SP7Q8TDD2 431 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 PRYO14603 147 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 RSPO4Q2I0M5 234 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 RNF183Q96D59 192 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 KLF2Q9Y5W3 355 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 A0A0G2JMZ2 1700 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 LRRC37A2A6NM11 1700 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 LRRC37AA6NMS7 1700 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 CGAP01215 116 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
SCN1A-212ENST00000636194 ADAMTS7Q9UKP4 1686 aa5.02□□□□□ -1.61
SCN1A-212ENST00000636194 A0A087WWC5 75 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 VSIG8P0DPA2 414 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 RPL15P61313 204 aaKnown RBP5.01□□□□□ -1.61
SCN1A-212ENST00000636194 SMIM14Q96QK8 99 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 H0Y9J4 135 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 MINOS1Q5TGZ0 78 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 FAM104BQ5XKR9 115 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 PRR13Q9NZ81 148 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 MINOS1-NBL1R4GNA1 71 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 A0A1W2PRS3 328 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 F8VVB4 439 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 F8VWA3 439 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 IGF2P01344 180 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TIRAPP58753 221 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 RND3P61587 244 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 C15orf32Q32M92 178 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 LSM4Q9Y4Z0 139 aaKnown RBP5.01□□□□□ -1.61
SCN1A-212ENST00000636194 IGHV3-53P01767 116 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 CCL4P13236 92 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 CBLN3Q6UW01 205 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TMEM243Q9BU79 118 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 ZNF138P52744 262 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 ZSWIM8A7E2V4 1837 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TRAV40A0A0B4J280 105 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 Q6ZWC4 215 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 DYNAPQ8N1N2 210 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 C9orf62Q8N4C0 152 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 C3orf22Q8N5N4 141 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 LINC01560Q8TB33 94 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 NABP1Q96AH0 204 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 A0A0J9YW62 118 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 SPINK2P20155 84 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 PFN2P35080 140 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 PPP1R32Q7Z5V6 425 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 LINC01356Q8N9X3 169 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TMEM141Q96I45 108 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TM2D2Q9BX73 214 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 TMEM133Q9H2Q1 129 aa5.01□□□□□ -1.61
SCN1A-212ENST00000636194 FNDC1Q4ZHG4 1894 aaPredicted RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 SPATA31B1PQ5VZV4 182 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 ZNF826PQ6ZT77 177 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 C9orf139Q6ZV77 190 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 LINC01565O15544 149 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 UPK3AO75631 287 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 GATA4P43694 442 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 LHX2P50458 406 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 RPL23P62829 140 aaKnown RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 PSG7Q13046 419 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 BOD1L2Q8IYS8 172 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 LEAP2Q969E1 77 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SYNJ2BPP57105 145 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 GLRX5Q86SX6 157 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SIGLEC12Q96PQ1 595 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 KLK13Q9UKR3 277 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 ANKHD1Q8IWZ3 2542 aaKnown RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 A0A1B0GWJ7 208 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 PRSS29PA6NIE9 313 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 PLA2G2AP14555 144 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SPXQ9BT56 116 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 KLK5Q9Y337 293 aaPredicted RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 IGLL5B9A064 214 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SLC25A16P16260 332 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 EIF4EBP2Q13542 120 aaPredicted RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 LCNL1Q6ZST4 164 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 HCSTQ9UBK5 93 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 UBE2CO00762 179 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 CXCL10P02778 98 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SP5Q6BEB4 398 aaPredicted RBP5□□□□□ -1.61
SCN1A-212ENST00000636194 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 SIPA1L1O43166 1804 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 NDUFA4O00483 81 aa5□□□□□ -1.61
SCN1A-212ENST00000636194 CCL20P78556 96 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms