RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TLCD1Q96CP7 247 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FXYD5Q96DB9 178 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 BORCS8Q96FH0 119 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL48Q96GC5 212 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CEP19Q96LK0 163 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DNAJC30Q96LL9 226 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OPALINQ96PE5 141 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GPX7Q96SL4 187 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TSSK6Q9BXA6 273 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SAMD10Q9BYL1 202 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC19A3Q9BZV2 496 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PBOV1Q9GZY1 135 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 NAA50Q9GZZ1 169 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FXYD6Q9H0Q3 95 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2D2Q9H210 308 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ARMC7Q9H6L4 198 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 METTL8Q9H825 291 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TMBIM4Q9HC24 238 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HES4Q9HCC6 221 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 BCL2L10Q9HD36 194 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CLN6Q9NWW5 311 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM206AQ9NX38 181 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TAS2R7Q9NYW3 318 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IDI2-AS1Q9NZ38 188 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CALML5Q9NZT1 146 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL36Q9P0J6 103 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 MRM2Q9UI43 246 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GNG8Q9UK08 70 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 RABL2BQ9UNT1 228 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 RCL1Q9Y2P8 373 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 RRP15Q9Y3B9 282 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TBL2Q9Y4P3 447 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAPPC1Q9Y5R8 145 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 R4GN34 69 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TRGV10A0A0A0MS01 117 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAV8-4A0A0B4J246 113 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAV8-6A0A0B4J262 113 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-6A0A0C4DH72 117 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A0J9YY99 117 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM269A0A1B0GVZ9 245 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ARRDC5A6NEK1 342 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 NUPR2A6NF83 97 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C2orf70A6NJV1 201 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM210A6NLX4 147 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TRPC5OSA6NMA1 111 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF729A6NN14 1252 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RIIAD1A6NNX1 92 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 EVPLLA8MZ36 301 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR11H12B2RN74 326 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C9JQL5 133 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC01619G3V211 115 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LY6LH3BQJ8 138 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 H3BSA7 217 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 BUB1B-PAK6H3BSN5 160 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 H7C2Y5 167 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 I3L521 148 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 K7ERS5 55 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 AIPO00170 330 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CCRL2O00421 344 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TOR1AO14656 332 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PSPHP1O15172 72 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 E2F6O75461 281 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR7C1O76099 320 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CRYZL1O95825 349 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 P01737 135 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IGHV3-53P01767 116 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IGHG2P01859 326 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 HBZP02008 142 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-16P04430 117 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ISG15P05161 165 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CTSDP07339 412 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5AC1P0C628 307 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF705DP0CH99 300 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF705BP0CI00 300 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 COX5BP10606 129 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFA4P12838 97 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF3P17036 446 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-GP17693 338 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LGALS3P17931 250 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GPX2P18283 190 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ATF1P18846 271 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 S100A2P29034 98 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC6A1P30531 599 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GNRHRP30968 328 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LCN1P31025 176 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 KDELR2P33947 212 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LGALS7P47929 136 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 INSL3P51460 131 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RBM11P57052 281 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10A3P58181 314 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 FXYD4P59646 89 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFB131AP59861 70 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PSME3P61289 254 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RPS25P62851 125 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RPL30P62888 115 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GNG3P63215 75 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PSPHP78330 225 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35B1P78383 322 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RHOGP84095 191 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IL18Q14116 193 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms