RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 OR4F4Q96R69 305 aa5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 METTL26Q96S19 204 aa5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 TCEAL7Q9BRU2 100 aa5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 YTHDF2Q9Y5A9 579 aaKnown RBP5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 DNHD1Q96M86 4753 aa5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 SVEP1Q4LDE5 3571 aa5.82□□□□□ -1.48
PTP4A1-206ENST00000627002 IGHV3-35A0A0C4DH35 117 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 INAFM1C9JVW0 142 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 TCF21O43680 179 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 NDUFA7O95182 113 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 SNAPINO95295 136 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 RPLP1P05386 114 aaKnown RBP5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 NBEAP1P0C6P0 100 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 PYYP10082 97 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 RPL7P18124 248 aaKnown RBP5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 CRYBB3P26998 211 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 ATP5G3P48201 142 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 FAM106AQ4KMX7 169 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 C1orf194Q5T5A4 169 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 LEMD1Q68G75 181 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 C10orf99Q6UWK7 81 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 PRIMA1Q86XR5 153 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 CCDC28AQ8IWP9 274 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 KLHDC1Q8N7A1 406 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 WFDC12Q8WWY7 111 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 RPUSD4Q96CM3 377 aaKnown RBP5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF414Q96IQ9 312 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 NIPSNAP3BQ9BS92 247 aa5.81□□□□□ -1.48
PTP4A1-206ENST00000627002 MAP1AP78559 2803 aaPredicted RBP5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 ABCA1O95477 2261 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 CLPSL1A2RUU4 121 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 CRLF1O75462 422 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 TRBV12-3P01733 135 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 CDX1P47902 265 aaPredicted RBP5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 PDE6HQ13956 83 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 FAM90A2PQ658T7 463 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 GPHB5Q86YW7 130 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 OR8I2Q8N0Y5 310 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 BLNKQ8WV28 456 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 C11orf52Q96A22 123 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 C20orf24Q9BUV8 137 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 PLXNB1O43157 2135 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 ZANQ9Y493 2812 aa5.8□□□□□ -1.48
PTP4A1-206ENST00000627002 TRBV19A0A075B6N1 114 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 SCO2A0A1W2PP80 73 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 A0A1W2PS18 150 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF727A8MUV8 499 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 GGTLC3B5MD39 225 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 H3BQ15 152 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 K7EMT4 169 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 MRPS12O15235 138 aaKnown RBP5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 BUB3O43684 328 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 IGLC2P0DOY2 106 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ATF4P18848 351 aaPredicted RBP5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 BMI1P35226 326 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 GALR1P47211 349 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 MEOX2P50222 304 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 SUMO1P63165 101 aaKnown RBP5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 PNRC1Q12796 327 aaPredicted RBP5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 GUCA2BQ16661 112 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF674Q2M3X9 581 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 RPEL1Q2QD12 228 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 OXLD1Q5BKU9 147 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 CLRN3Q8NCR9 226 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 C4orf3Q8WVX3 66 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 TVP23CQ96ET8 276 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 GRAMD2BQ96HH9 432 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 OR5B12Q96R08 314 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 SMIM7Q9BQ49 75 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ELOVL1Q9BW60 279 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 PARLQ9H300 379 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF586Q9NXT0 402 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 NAT8Q9UHE5 227 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 UFC1Q9Y3C8 167 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 U3KQE9 123 aa5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF469Q96JG9 3925 aaPredicted RBP5.79□□□□□ -1.48
PTP4A1-206ENST00000627002 IGHV3OR16-8A0A075B7F1 116 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 A0A087X0K7 114 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF320A2RRD8 509 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 PGPA6NDG6 321 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 B4DEV8 164 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 M0R036 132 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 LGALS9O00182 355 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 ZNF253O75346 499 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 NDUFB4O95168 129 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 MYCNOSP40205 109 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 RANP62826 216 aaKnown RBP5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 PSG9Q00887 426 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 RHEBQ15382 184 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 TMEM241Q24JQ0 296 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 C16orf54Q6UWD8 224 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 UNQ9165/PRO28630Q6UXU0 137 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 REC114Q7Z4M0 266 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 C5orf17Q8NAS9 161 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 LINC01006Q8NI28 216 aa5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 WIPF2Q8TF74 440 aaPredicted RBP5.78□□□□□ -1.48
PTP4A1-206ENST00000627002 HIST1H2BAQ96A08 127 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms