RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 UBE2CO00762 179 aa8.98□□□□□ -0.97
VPS8-227ENST00000625842 FOXC2Q99958 501 aa8.98□□□□□ -0.97
VPS8-227ENST00000625842 PKDREJQ9NTG1 2253 aa8.98□□□□□ -0.97
VPS8-227ENST00000625842 MDC1Q14676 2089 aaKnown RBP8.98□□□□□ -0.97
VPS8-227ENST00000625842 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 ZNF324BQ6AW86 544 aaPredicted RBP8.97□□□□□ -0.97
VPS8-227ENST00000625842 RNF144BQ7Z419 303 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 TRPT1Q86TN4 253 aaKnown RBP8.97□□□□□ -0.97
VPS8-227ENST00000625842 NOTCH3Q9UM47 2321 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 NDPQ00604 133 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 RNF151Q2KHN1 245 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 THAP8Q8NA92 274 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 DOCK7Q96N67 2140 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 MIXL1Q9H2W2 232 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 PARLQ9H300 379 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 NHP2Q9NX24 153 aaKnown RBP8.97□□□□□ -0.97
VPS8-227ENST00000625842 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 GAGE12BA1L429 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 GAGE7O76087 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 CDKN1BP46527 198 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 FXYD7P58549 80 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 MTCL1Q9Y4B5 1905 aaKnown RBP8.97□□□□□ -0.97
VPS8-227ENST00000625842 FNDC10F2Z333 226 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 CCL20P78556 96 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 FOXL2NBQ6ZUU3 175 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 ZNF843Q8N446 348 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 MESP1Q9BRJ9 268 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 CACNA1DQ01668 2161 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 PIKFYVEQ9Y2I7 2098 aa8.97□□□□□ -0.97
VPS8-227ENST00000625842 IGKV2D-24A0A075B6R9 120 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 NPIPB5A8MRT5 1133 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 APOHP02749 345 aaPredicted RBP8.96□□□□□ -0.97
VPS8-227ENST00000625842 SDHCQ99643 169 aaPredicted RBP8.96□□□□□ -0.97
VPS8-227ENST00000625842 TMEM243Q9BU79 118 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 MS4A6AQ9H2W1 248 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 PMS2P5A8MQ11 134 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 IGHV4-39P01824 125 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 IGFBP3P17936 291 aaPredicted RBP8.96□□□□□ -0.97
VPS8-227ENST00000625842 WT1P19544 449 aaPredicted RBP8.96□□□□□ -0.97
VPS8-227ENST00000625842 SPATA25Q9BR10 227 aa8.96□□□□□ -0.97
VPS8-227ENST00000625842 RBBP6Q7Z6E9 1792 aaKnown RBP8.96□□□□□ -0.97
VPS8-227ENST00000625842 IGHV2-70P01814 119 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 NDUFA11Q86Y39 141 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 RPRMLQ8N4K4 120 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 OR2K2Q8NGT1 345 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 WFDC12Q8WWY7 111 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 MIA3Q5JRA6 1907 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 WNK2Q9Y3S1 2297 aa8.96□□□□□ -0.98
VPS8-227ENST00000625842 C5orf63A6NC05 138 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 FOXI2Q6ZQN5 318 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 WDR83OSQ9Y284 106 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 OTOGLQ3ZCN5 2332 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 CLPSP04118 112 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 PAX9P55771 341 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 LYZL4Q96KX0 146 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 SMPXQ9UHP9 88 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 CHD5Q8TDI0 1954 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 A0A087WWC5 75 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 HILS1P60008 231 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 ZNF407Q9C0G0 2248 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 PCNX2A6NKB5 2137 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 LOXP28300 417 aaPredicted RBP8.95□□□□□ -0.98
VPS8-227ENST00000625842 CSTL1Q9H114 145 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 IL36BQ9NZH7 164 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 COX11Q9Y6N1 276 aa8.95□□□□□ -0.98
VPS8-227ENST00000625842 ARFGEF3Q5TH69 2177 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 KLF5Q13887 457 aaPredicted RBP8.94□□□□□ -0.98
VPS8-227ENST00000625842 C10orf55Q5SWW7 151 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 LY6G5BQ8NDX9 201 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 KLF12Q9Y4X4 402 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 ADORA2A-AS1P86434 159 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 IZUMO1RA6ND01 250 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 DANCRP0C864 163 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 WIPF2Q8TF74 440 aaPredicted RBP8.94□□□□□ -0.98
VPS8-227ENST00000625842 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 SONP18583 2426 aaKnown RBP8.94□□□□□ -0.98
VPS8-227ENST00000625842 GAGE12JA6NER3 117 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 SSBP2P81877 361 aaPredicted RBP8.94□□□□□ -0.98
VPS8-227ENST00000625842 GAGE1Q13065 139 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 GAGE4Q13068 117 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 GAGE5Q13069 117 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 GAGE13Q4V321 117 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 LHFPL4Q7Z7J7 247 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 C10orf126Q8N4M7 172 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 IGF2BP2-AS1Q96M15 143 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 PPP1R3EQ9H7J1 279 aa8.94□□□□□ -0.98
VPS8-227ENST00000625842 ZNF48Q96MX3 618 aaPredicted RBP8.93□□□□□ -0.98
VPS8-227ENST00000625842 SHISA9B4DS77 424 aa8.93□□□□□ -0.98
VPS8-227ENST00000625842 ELF5Q9UKW6 265 aaPredicted RBP8.93□□□□□ -0.98
VPS8-227ENST00000625842 TFF3Q07654 80 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms