RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
SNX1-214ENST00000625244 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
SNX1-214ENST00000625244 C5orf51A6NDU8 294 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 HELTA6NFD8 242 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 SNRPGP15A8MWD9 76 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 GNG7O60262 68 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 P2RY1P47900 373 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
SNX1-214ENST00000625244 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
SNX1-214ENST00000625244 CDPF1Q6NVV7 123 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
SNX1-214ENST00000625244 LOC102723971A0A1B0GUV8 181 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 SSNA1O43805 119 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 SCGB2A1O75556 95 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 SCGB1D2O95969 90 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 MT-CO2P00403 227 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 NKX2-1P43699 371 aaPredicted RBP9.63□□□□□ -0.87
SNX1-214ENST00000625244 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
SNX1-214ENST00000625244 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
SNX1-214ENST00000625244 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
SNX1-214ENST00000625244 RBKSQ9H477 322 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 U3KQ87 197 aa9.63□□□□□ -0.87
SNX1-214ENST00000625244 A0A1W2PS18 150 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 SYNGR2O43760 224 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 PITX3O75364 302 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 NPPCP23582 126 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
SNX1-214ENST00000625244 RAB11AP62491 216 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 ZNF600Q6ZNG1 722 aa9.62□□□□□ -0.87
SNX1-214ENST00000625244 F5H768 121 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 CCSO14618 274 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 IFNA5P01569 189 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 IGKV3-20P01619 116 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
SNX1-214ENST00000625244 CRYBB3P26998 211 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 OPRK1P41145 380 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 LINC00315P59091 139 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 CLINT1Q14677 625 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 ETFRF1Q6IPR1 90 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
SNX1-214ENST00000625244 RNF141Q8WVD5 230 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 ZNF586Q9NXT0 402 aa9.61□□□□□ -0.87
SNX1-214ENST00000625244 PAIP2BQ9ULR5 123 aaKnown RBP9.61□□□□□ -0.87
SNX1-214ENST00000625244 A0A1W2PPQ1 181 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 GOSR2O14653 212 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 HBE1P02100 147 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 IAPPP10997 89 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 DEFB1P60022 68 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 C2orf83Q53S99 150 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 C1orf158Q8N1D5 194 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 OR4D5Q8NGN0 318 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
SNX1-214ENST00000625244 C2orf50Q96LR7 162 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 UHRF2Q96PU4 802 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 METTL26Q96S19 204 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
SNX1-214ENST00000625244 L7N2F9 121 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 SSSCA1O60232 199 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 PVALBP20472 110 aaPredicted RBP9.59□□□□□ -0.87
SNX1-214ENST00000625244 NPBWR1P48145 328 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 VAMP2P63027 116 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 CYCSP99999 105 aaKnown RBP9.59□□□□□ -0.87
SNX1-214ENST00000625244 BSXQ3C1V8 233 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 ZNF709Q8N972 641 aa9.59□□□□□ -0.87
SNX1-214ENST00000625244 EREGO14944 169 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 SLC25A4P12235 298 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 SNRPD3P62318 126 aaKnown RBP9.58□□□□□ -0.88
SNX1-214ENST00000625244 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNX1-214ENST00000625244 ID3Q02535 119 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 SPANXN5Q5MJ07 72 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 PSENENQ9NZ42 101 aa9.58□□□□□ -0.88
SNX1-214ENST00000625244 STRAPQ9Y3F4 350 aaKnown RBP9.58□□□□□ -0.88
SNX1-214ENST00000625244 C7orf66A4D0T2 115 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 TMEM50AO95807 157 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 DEFB130BP0DP73 79 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 DEFB130AP0DP74 79 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 S100A10P60903 97 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 SLC35E1Q96K37 410 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 MGAT4CQ9UBM8 478 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 GOLT1BQ9Y3E0 138 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 LSM5Q9Y4Y9 91 aaKnown RBP9.57□□□□□ -0.88
SNX1-214ENST00000625244 ALG5Q9Y673 324 aa9.57□□□□□ -0.88
SNX1-214ENST00000625244 H3BP45 60 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 MBPP02686 304 aaPredicted RBP9.56□□□□□ -0.88
SNX1-214ENST00000625244 RLN2P04090 185 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 PRM2P04554 102 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 BCAP31P51572 246 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 TAS2R30P59541 319 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 UPK3BQ9BT76 320 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms