RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
PNKP-217ENST00000625216 IGHV3-35A0A0C4DH35 117 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 NUPL2O15504 423 aaKnown RBP9.54□□□□□ -0.88
PNKP-217ENST00000625216 FABP1P07148 127 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 ARL3P36405 182 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 FGF8P55075 233 aaPredicted RBP9.54□□□□□ -0.88
PNKP-217ENST00000625216 CCL20P78556 96 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 MIR17HGQ75NE6 70 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 SLC7A5P1Q8MH63 180 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 OR51G1Q8NGK1 321 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 OR1L4Q8NGR5 311 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 OR1B1Q8NGR6 318 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 RNF125Q96EQ8 232 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 SEPSECSQ9HD40 501 aaKnown RBP9.54□□□□□ -0.88
PNKP-217ENST00000625216 MED9Q9NWA0 146 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 GAR1Q9NY12 217 aaKnown RBP9.54□□□□□ -0.88
PNKP-217ENST00000625216 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
PNKP-217ENST00000625216 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 SCGB2A1O75556 95 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 IL4P05112 153 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 FOLR2P14207 255 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 ORM2P19652 201 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 RHOBP62745 196 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 USF2Q15853 346 aaPredicted RBP9.53□□□□□ -0.88
PNKP-217ENST00000625216 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 DYNLRB2Q8TF09 96 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 GATAD1Q8WUU5 269 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 SFT2D1Q8WV19 159 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 RCHY1Q96PM5 261 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 PFDN5Q99471 154 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 MRPL32Q9BYC8 188 aaKnown RBP9.53□□□□□ -0.88
PNKP-217ENST00000625216 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
PNKP-217ENST00000625216 PUS1Q9Y606 427 aaKnown RBP eCLIP9.53□□□□□ -0.88
PNKP-217ENST00000625216 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 H3BRN7 92 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 HYPMO75409 117 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 HBE1P02100 147 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 CBLN1P23435 193 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 CD300EQ496F6 205 aaPredicted RBP9.52□□□□□ -0.89
PNKP-217ENST00000625216 Q8WTZ3 238 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 MARC2Q969Z3 335 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 SLC25A2Q9BXI2 301 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 TUBA4BQ9H853 241 aa9.52□□□□□ -0.89
PNKP-217ENST00000625216 MRPL27Q9P0M9 148 aaKnown RBP9.52□□□□□ -0.89
PNKP-217ENST00000625216 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
PNKP-217ENST00000625216 TRAV5A0A0B4J249 113 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 IZUMO1RA6ND01 250 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 A8MWP6 167 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 ARL14EPLP0DKL9 152 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 TOMM20LQ6UXN7 152 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 LINC00305Q7Z4B0 112 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 ZNF503Q96F45 646 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 FAM167A-AS1Q96KT0 104 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 RNF2Q99496 336 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 TMPRSS5Q9H3S3 457 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 HIGD1AQ9Y241 93 aa9.51□□□□□ -0.89
PNKP-217ENST00000625216 C8orf88P0DMB2 117 aa9.5□□□□□ -0.89
PNKP-217ENST00000625216 RELQ04864 619 aaPredicted RBP9.5□□□□□ -0.89
PNKP-217ENST00000625216 SLC25A39Q9BZJ4 359 aaPredicted RBP9.5□□□□□ -0.89
PNKP-217ENST00000625216 UFC1Q9Y3C8 167 aa9.5□□□□□ -0.89
PNKP-217ENST00000625216 TMEM213A2RRL7 107 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 GCHFRP30047 84 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 CD81P60033 236 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
PNKP-217ENST00000625216 KHDC3LQ587J8 217 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 TOR2AQ5JU69 321 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 UNQ9165/PRO28630Q6UXU0 137 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 FAM210AQ96ND0 272 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 SHANK2-AS3Q9BTD1 123 aa9.49□□□□□ -0.89
PNKP-217ENST00000625216 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 RAB19A4D1S5 217 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 NDUFA4O00483 81 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 OR7C2O60412 319 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 CXorf1O96002 111 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 PYYP10082 97 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 TAS2R45P59539 299 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 HAGHQ16775 308 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms