RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 OR51V1Q9H2C8 321 aa0.93□□□□□ -2.26
CDKL5-207ENST00000624700 ACER3Q9NUN7 267 aa0.93□□□□□ -2.26
CDKL5-207ENST00000624700 V9GYY5 206 aaPredicted RBP0.93□□□□□ -2.26
CDKL5-207ENST00000624700 NIPBLQ6KC79 2804 aaeCLIP0.93□□□□□ -2.26
CDKL5-207ENST00000624700 XIRP2A4UGR9 3374 aa0.93□□□□□ -2.26
CDKL5-207ENST00000624700 LOC400499M0QZD8 3231 aa0.93□□□□□ -2.26
CDKL5-207ENST00000624700 COL12A1Q99715 3063 aa0.93□□□□□ -2.26
CDKL5-207ENST00000624700 ARHGEF28Q8N1W1 1705 aaKnown RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 KDM6AO15550 1401 aaPredicted RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 FMN1Q68DA7 1419 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 CYB5BO43169 146 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 HAND1O96004 215 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 TCRBP04435 133 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 DEFA1P59665 94 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 LSM6P62312 80 aaKnown RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 RANP62826 216 aaKnown RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 CCL7P80098 99 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 ITGB3BPQ13352 177 aaPredicted RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 ESRGQ1W209 222 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 AKIRIN2Q53H80 203 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 BRMS1LQ5PSV4 323 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 C3orf56Q8N813 242 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 LINC00467Q9BRT7 94 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 ZFP30Q9Y2G7 519 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 RBBP6Q7Z6E9 1792 aaKnown RBP0.92□□□□□ -2.26
CDKL5-207ENST00000624700 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 ALKQ9UM73 1620 aa0.92□□□□□ -2.26
CDKL5-207ENST00000624700 CDH23Q9H251 3354 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 TNS3Q68CZ2 1445 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 DNAH14Q0VDD8 3507 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 CLASP1Q7Z460 1538 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 TMEM114B3SHH9 223 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 RHOBP62745 196 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 Q6Q795 121 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 LCA10Q71F78 164 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 C6orf62Q9GZU0 229 aaPredicted RBP0.91□□□□□ -2.26
CDKL5-207ENST00000624700 TLNRD1Q9H1K6 362 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 PRELID3BQ9Y3B1 194 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
CDKL5-207ENST00000624700 SOSTDC1Q6X4U4 206 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 OR52L1Q8NGH7 329 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 OR8D4Q8NGM9 314 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 GNPDA2Q8TDQ7 276 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 NMNAT1Q9HAN9 279 aaPredicted RBP0.9□□□□□ -2.27
CDKL5-207ENST00000624700 IDI2-AS1Q9NZ38 188 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 FBXO5Q9UKT4 447 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 ACANP16112 2415 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 THOC2Q8NI27 1593 aaKnown RBP0.9□□□□□ -2.27
CDKL5-207ENST00000624700 SMG1Q96Q15 3661 aaKnown RBP0.9□□□□□ -2.27
CDKL5-207ENST00000624700 EML5Q05BV3 1969 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 KIAA1549Q9HCM3 1950 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 WNK1Q9H4A3 2382 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 PRUNE2Q8WUY3 3088 aa0.9□□□□□ -2.27
CDKL5-207ENST00000624700 MYLKQ15746 1914 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 PLXNA4Q9HCM2 1894 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 C1orf196B1AJZ1 125 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 ZNF736B4DX44 427 aaPredicted RBP0.89□□□□□ -2.27
CDKL5-207ENST00000624700 YPEL2Q96QA6 119 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 KIFC1Q9BW19 673 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 UCK1Q9HA47 277 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 C14orf105Q9NVL8 296 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 DMXL1Q9Y485 3027 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 EHBP1L1Q8N3D4 1523 aa0.89□□□□□ -2.27
CDKL5-207ENST00000624700 E9PCH4 1651 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 XIRP1Q702N8 1843 aaKnown RBP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 TRGV10A0A0A0MS01 117 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 SMIM17P0DL12 118 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 SRP14P37108 136 aaKnown RBP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 EIF5AP63241 154 aaKnown RBP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 LIN52Q52LA3 116 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 OR52R1Q8NGF1 315 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 TMEM254Q8TBM7 123 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 SLC25A40Q8TBP6 338 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 TMEM133Q9H2Q1 129 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 PARVBQ9HBI1 364 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 BCL2L10Q9HD36 194 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 UTP11Q9Y3A2 253 aaKnown RBP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 MAPKBP1O60336 1514 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 CCDC144AA2RUR9 1427 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 COL7A1Q02388 2944 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 RIMS1Q86UR5 1692 aaKnown RBP0.88□□□□□ -2.27
CDKL5-207ENST00000624700 F8P00451 2351 aa0.88□□□□□ -2.27
CDKL5-207ENST00000624700 ZZEF1O43149 2961 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 ALPK3Q96L96 1907 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 TRAV3A0A0B4J244 114 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 CCDC160A6NGH7 325 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 OR7C1O76099 320 aaPredicted RBP0.87□□□□□ -2.27
CDKL5-207ENST00000624700 ERP29P30040 261 aaKnown RBP0.87□□□□□ -2.27
CDKL5-207ENST00000624700 TEX261Q6UWH6 196 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 SLC30A7Q8NEW0 376 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 WFDC5Q8TCV5 224 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 ADAT3Q96EY9 351 aaPredicted RBP0.87□□□□□ -2.27
CDKL5-207ENST00000624700 AMELYQ99218 206 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 UQCC1Q9NVA1 299 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 U3KQ87 197 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 DMXL2Q8TDJ6 3036 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms