RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CFHR4Q92496 578 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 SDF2L1Q9HCN8 221 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 TRAV12-3A0A0B4J271 114 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 A6NDX4 124 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 PPP1R2P9O14990 202 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 GCSAMLQ5JQS6 135 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 SUN5Q8TC36 379 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 AQP10Q96PS8 301 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 NDUFA4L2Q9NRX3 87 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 CFAP54Q96N23 3096 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 STAB1Q9NY15 2570 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 LOC102723971A0A1B0GUV8 181 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 NDUFA4O00483 81 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 FHITP49789 147 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 TREML4Q6UXN2 200 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 C11orf42Q8N5U0 333 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 Q8NFD4 153 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 PHYHIPLQ96FC7 376 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 F5H768 121 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 INSP01308 110 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 SUPT4H1P63272 117 aaKnown RBP7.17□□□□□ -1.26
HDAC9-229ENST00000622668 C8orf31Q8N9H6 132 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 TRGV9Q99603 122 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 WDR83OSQ9Y284 106 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 HSBP1O75506 76 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 BCL2P10415 239 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 AANATQ16613 207 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 NMSQ5H8A3 153 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 IGHV4OR15-8A0A075B7B6 117 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 A0A087WW49 117 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 NPIPB5A8MRT5 1133 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 IGHG2P01859 326 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 SFTA3P0C7M3 94 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF880Q6PDB4 577 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 PIFOQ8TCI5 191 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
HDAC9-229ENST00000622668 AGMATQ9BSE5 352 aa7.17□□□□□ -1.26
HDAC9-229ENST00000622668 C20orf202A1L168 122 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 H3BUA1 57 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 DAD1P61803 113 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 Q5BKY6 102 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 RNASEKQ6P5S7 137 aaKnown RBP7.16□□□□□ -1.26
HDAC9-229ENST00000622668 OR9G4Q8NGQ1 327 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 AJUBAQ96IF1 538 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 RITA1Q96K30 269 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 KCNS1Q96KK3 526 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 PRR25Q96S07 402 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 SDHCQ99643 169 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-229ENST00000622668 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 GNG5P63218 68 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 SPINK13Q1W4C9 94 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 IBA57Q5T440 356 aaKnown RBP7.16□□□□□ -1.26
HDAC9-229ENST00000622668 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 EXOC3-AS1Q8N2X6 119 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 LY6G5BQ8NDX9 201 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 VCANP13611 3396 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 PRB2P02812 416 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-229ENST00000622668 TRGC1P0CF51 173 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF345Q14585 488 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 HIST1H2BAQ96A08 127 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-229ENST00000622668 NAT8Q9UHE5 227 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 TNFRSF18Q9Y5U5 241 aa7.16□□□□□ -1.26
HDAC9-229ENST00000622668 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 B4DEV8 164 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 TOMM40O96008 361 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 DYNAPQ8N1N2 210 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 IGKV2-40A0A087WW87 121 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-229ENST00000622668 M0R3E3 92 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 IGKV2D-40P01614 121 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-229ENST00000622668 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
HDAC9-229ENST00000622668 LRTM2Q8N967 370 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 GGTLC1Q9BX51 225 aa7.15□□□□□ -1.26
HDAC9-229ENST00000622668 NUDT3O95989 172 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 PPIFP30405 207 aaKnown RBP7.15□□□□□ -1.27
HDAC9-229ENST00000622668 BTN1A1Q13410 526 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 AWAT1Q58HT5 328 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 TXNDC17Q9BRA2 123 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 NUP210LQ5VU65 1888 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 PEX7O00628 323 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 IGLL1P15814 213 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.27
HDAC9-229ENST00000622668 IGSF10Q6WRI0 2623 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 C15orf62A8K5M9 175 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 CFHR3Q02985 330 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 CD300CQ08708 224 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 OR11H4Q8NGC9 324 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 OR4D5Q8NGN0 318 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 A0A087WX48 190 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 FABP5P3A8MUU1 101 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 CLDN34H7C241 214 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 PSCAO43653 123 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 RPS20P60866 119 aaKnown RBP7.14□□□□□ -1.27
HDAC9-229ENST00000622668 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 NDUFA11Q86Y39 141 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 PGLYRP4Q96LB8 373 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms