RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 A0A1B0GWJ7 208 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 LINC00614P0C842 121 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 UTF1Q5T230 341 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 ZNF841Q6ZN19 808 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 ZNF329Q86UD4 541 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 FNDC4Q9H6D8 234 aaPredicted RBP10.36□□□□□ -0.75
MSH6-215ENST00000622629 EREGO14944 169 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 ZNF138P52744 262 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
MSH6-215ENST00000622629 V9GYV3 84 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 K7EN84 100 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
MSH6-215ENST00000622629 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 LINC00527Q9UJ94 153 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 SOX21Q9Y651 276 aaPredicted RBP10.35□□□□□ -0.75
MSH6-215ENST00000622629 A0A1B0GV72 72 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 LHBP01229 141 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 SSBP2P81877 361 aaPredicted RBP10.35□□□□□ -0.75
MSH6-215ENST00000622629 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 TEX36Q5VZQ5 186 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 MYOZ3Q8TDC0 251 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 NAV3Q8IVL0 2385 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
MSH6-215ENST00000622629 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 PYGO2Q9BRQ0 406 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 COL6A3P12111 3177 aa10.35□□□□□ -0.75
MSH6-215ENST00000622629 A0A1B0GW15 77 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 NPIPB5A8MRT5 1133 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 POU2AF1Q16633 256 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
MSH6-215ENST00000622629 RPL15P61313 204 aaKnown RBP10.34□□□□□ -0.75
MSH6-215ENST00000622629 TPTE2P1Q5T6R2 138 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 DMRTC2Q8IXT2 367 aaPredicted RBP10.34□□□□□ -0.75
MSH6-215ENST00000622629 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 PTPN13Q12923 2485 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 THBDP07204 575 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 RAB37Q96AX2 223 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 EYSQ5T1H1 3165 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 F2Z2F3 143 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
MSH6-215ENST00000622629 ATP5G2Q06055 141 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
MSH6-215ENST00000622629 SLC25A2Q9BXI2 301 aa10.34□□□□□ -0.75
MSH6-215ENST00000622629 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 Q6ZWC4 215 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 CTSZQ9UBR2 303 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 HCFC1P51610 2035 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 TRAV9-2A0A087WT02 112 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 IGKV2-40A0A087WW87 121 aaPredicted RBP10.33□□□□□ -0.76
MSH6-215ENST00000622629 IGKV2D-40P01614 121 aaPredicted RBP10.33□□□□□ -0.76
MSH6-215ENST00000622629 TRGV3P03979 118 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 RHOGP84095 191 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 EEF1AKMT3Q96AZ1 226 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 A0A1W2PS18 150 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 ATP5J2P56134 94 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 DDB2Q92466 427 aa10.33□□□□□ -0.76
MSH6-215ENST00000622629 C3orf36Q3SXR2 165 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 CPAMD8Q8IZJ3 1885 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 DYSFO75923 2080 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 SLAQ13239 276 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 C5orf64Q2M2E5 130 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 A6NDN8 102 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 NUPR1O60356 82 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 IGHV3-11P01762 117 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 P0C879 139 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 TM4SF20Q53R12 229 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 Q8TAT8 98 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 FAM168AQ92567 244 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 ZNF414Q96IQ9 312 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 NUTF2P61970 127 aaKnown RBP10.32□□□□□ -0.76
MSH6-215ENST00000622629 Q0VG73 95 aa10.32□□□□□ -0.76
MSH6-215ENST00000622629 C7orf71A4D174 169 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 SH2D7A6NKC9 451 aaPredicted RBP10.31□□□□□ -0.76
MSH6-215ENST00000622629 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
MSH6-215ENST00000622629 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 DNLZQ5SXM8 178 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 IGFBPL1Q8WX77 278 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 TANC2Q9HCD6 1990 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 RAB9AP51151 201 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 FAM71F2Q6NXP2 309 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 SCGB1D4Q6XE38 83 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 VMO1Q7Z5L0 202 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 C18orf32Q8TCD1 76 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 C2orf88Q9BSF0 95 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 M0R381 172 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 GCSHP23434 173 aa10.31□□□□□ -0.76
MSH6-215ENST00000622629 PHLDA3Q9Y5J5 127 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms