RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TMED3Q9Y3Q3 217 aa6.6□□□□□ -1.35
TARDBP-227ENST00000622057 RYR1P21817 5038 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 SMCO3A2RU48 225 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 H3BP45 60 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 M0R2Z0 102 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 NOL3O60936 208 aaKnown RBP6.59□□□□□ -1.35
TARDBP-227ENST00000622057 DUSP14O95147 198 aaKnown RBP6.59□□□□□ -1.35
TARDBP-227ENST00000622057 SFT2D2O95562 160 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 DEFB130BP0DP73 79 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 DEFB130AP0DP74 79 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 SLC25A6P12236 298 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 S100A7P31151 101 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 CNN1P51911 297 aaKnown RBP6.59□□□□□ -1.35
TARDBP-227ENST00000622057 AKR1C1Q04828 323 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 FCN2Q15485 313 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 AMTNQ6UX39 209 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 LRTM2Q8N967 370 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 OR11H7Q8NGC8 314 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 OR4D5Q8NGN0 318 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 MCFD2Q8NI22 146 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 SLIRPQ9GZT3 109 aaKnown RBP6.59□□□□□ -1.35
TARDBP-227ENST00000622057 SLC45A2Q9UMX9 530 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
TARDBP-227ENST00000622057 TRAV12-2A0A075B6T6 113 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 TRAV8-2A0A0B4J237 113 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PRSS46E5RG02 174 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 F5H768 121 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-227ENST00000622057 NUDT3O95989 172 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 INSP01308 110 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 IL5P05113 134 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PRB4P10163 310 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-227ENST00000622057 HTN1P15515 57 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 AZU1P20160 251 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 AP3S2P59780 193 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 RAP2BP61225 183 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 RHOBP62745 196 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PPP1R1AQ13522 171 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 C15orf53Q8NAA6 179 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 ZNF738Q8NE65 137 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 GPR82Q96P67 336 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 LINC01587Q99440 93 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 BCL7BQ9BQE9 202 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 SLC25A21Q9BQT8 299 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-227ENST00000622057 SLC25A39Q9BZJ4 359 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PPP1R14DQ9NXH3 145 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 PKD1P98161 4303 aa6.58□□□□□ -1.36
TARDBP-227ENST00000622057 LYRM9A8MSI8 78 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 A8MTW9 85 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 H3BMQ9 156 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 OR5G3P0C626 314 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 B2MP61769 119 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
TARDBP-227ENST00000622057 HIST1H1AQ02539 215 aaPredicted RBP6.57□□□□□ -1.36
TARDBP-227ENST00000622057 CYP2G1PQ6ZSU1 146 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 ACOT7LQ6ZUV0 252 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 BAP18Q8IXM2 172 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 LRRC20Q8TCA0 184 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 PSENENQ9NZ42 101 aa6.57□□□□□ -1.36
TARDBP-227ENST00000622057 H3BRN7 92 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 HYPMO75409 117 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 ADAP1O75689 374 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 ANXA7P20073 488 aaKnown RBP6.56□□□□□ -1.36
TARDBP-227ENST00000622057 RRAS2P62070 204 aaPredicted RBP6.56□□□□□ -1.36
TARDBP-227ENST00000622057 ID3Q02535 119 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 TRIM63Q969Q1 353 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 SHANK2-AS3Q9BTD1 123 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 HIGD1AQ9Y241 93 aa6.56□□□□□ -1.36
TARDBP-227ENST00000622057 ABCA13Q86UQ4 5058 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 C9orf170A2RU37 121 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 BOLA2-SMG1P6H3BVE0 249 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 ATP5G1P05496 136 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 SNRPCP09234 159 aaKnown RBP6.55□□□□□ -1.36
TARDBP-227ENST00000622057 LINC00869P0C866 280 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 RPL7P18124 248 aaKnown RBP6.55□□□□□ -1.36
TARDBP-227ENST00000622057 S100A5P33763 92 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 ATP5G3P48201 142 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 CCL18P55774 89 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 FAM3BP58499 235 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-227ENST00000622057 TNP2Q05952 138 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 OR8A1Q8NGG7 326 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 UHRF2Q96PU4 802 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 ARL6Q9H0F7 186 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 NPVFQ9HCQ7 196 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 V9GYH0 126 aa6.55□□□□□ -1.36
TARDBP-227ENST00000622057 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 CCDC160A6NGH7 325 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 CBY3A6NI87 242 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 SSSCA1O60232 199 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 CCNKO75909 580 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
TARDBP-227ENST00000622057 CXCL3P19876 107 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms