RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	PGP	A6NDG6	321 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	LY6L	H3BQJ8	138 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	LOXL1	Q08397	574 aa	Predicted RBP	13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967		Q8N976	141 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	BLNK	Q8WV28	456 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	RNF5	Q99942	180 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	ATG101	Q9BSB4	218 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	SNHG12	Q9BXW3	62 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZNF586	Q9NXT0	402 aa		13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967	TBL2	Q9Y4P3	447 aa	Known RBP	13.81	□□□□□ -0.2
FAM3A-222	ENST00000621967		A0A096LNT2	108 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	TDRG1	Q3Y452	100 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	C5orf17	Q8NAS9	161 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	GPR82	Q96P67	336 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	MRPL27	Q9P0M9	148 aa	Known RBP	13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	MYO9A	B2RTY4	2548 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	PPIAL4C	A0A0B4J2A2	164 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZNF324	O75467	553 aa	Predicted RBP	13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	IGLC1	P0CG04	106 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	APELA	P0DMC3	54 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	PPIAL4G	P0DN37	164 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	RAB4A	P20338	218 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	PRB3	Q04118	309 aa	Predicted RBP	13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	GDF5OS	Q5U4N7	250 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	ATP5L2	Q7Z4Y8	100 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	MAPK1IP1L	Q8NDC0	245 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	VN1R17P	Q8TDU5	208 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	SRSF12	Q8WXF0	261 aa	Known RBP	13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	LPAR2	Q9HBW0	351 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	NRN1	Q9NPD7	142 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	ITPR3	Q14573	2671 aa		13.8	□□□□□ -0.2
FAM3A-222	ENST00000621967	LOC105371242	A0A075B767	164 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	TOMM40	O96008	361 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	AMT	P48728	403 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	MRPL52	Q86TS9	123 aa	Known RBP	13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	C18orf32	Q8TCD1	76 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	RPE	Q96AT9	228 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	FMC1	Q96HJ9	113 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	TMEM68	Q96MH6	324 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	NEU1	Q99519	415 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	SRSF8	Q9BRL6	282 aa	Known RBP	13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	FBXL15	Q9H469	300 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	MED13L	Q71F56	2210 aa		13.79	□□□□□ -0.2
FAM3A-222	ENST00000621967	IGHV3-21	A0A0B4J1V1	117 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967		A0A1B0GXF2	115 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967		I3L2K1	104 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	OR2J3	O76001	311 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	LTA	P01374	205 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	COX7A1	P24310	79 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZFP36	P26651	326 aa	Known RBP	13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	PRR27	Q6MZM9	219 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	PRSS22	Q9GZN4	317 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZNF492	Q9P255	531 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967		M0R143	59 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	NUTF2	P61970	127 aa	Known RBP	13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	CT83	Q5H943	113 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	LHFPL4	Q7Z7J7	247 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	NIT1	Q86X76	327 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	LY6G5B	Q8NDX9	201 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	FAM103A1	Q9BTL3	118 aa	Known RBP	13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	VAMP8	Q9BV40	100 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967		Q9H3A6	140 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	GSX1	Q9H4S2	264 aa	Predicted RBP	13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	TMEM14C	Q9P0S9	112 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	HIGD1A	Q9Y241	93 aa		13.78	□□□□□ -0.2
FAM3A-222	ENST00000621967	HIGD1C	A8MV81	97 aa		13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	TCRA	P04437	139 aa		13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	PSG1	P11464	419 aa		13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	KLF5	Q13887	457 aa	Predicted RBP	13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	MIEN1	Q9BRT3	115 aa		13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	ABCA2	Q9BZC7	2435 aa		13.77	□□□□□ -0.21
FAM3A-222	ENST00000621967	ARHGAP32	A7KAX9	2087 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	C19orf71	A6NCJ1	209 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967		B4DSR2	109 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	PMCH	P20382	165 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	DIRC3	C9JPN6	131 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	LIPF	P07098	398 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	KRTDAP	P60985	99 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	LDLRAD2	Q5SZI1	272 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	LEMD1	Q68G75	181 aa		13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	RBM14	Q96PK6	669 aa	Known RBP	13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	RPP21	Q9H633	154 aa	Known RBP	13.76	□□□□□ -0.21
FAM3A-222	ENST00000621967	SMAD7	O15105	426 aa	Known RBP	13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	MSMB	P08118	114 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	LINC01356	Q8N9X3	169 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	OR4B1	Q8NGF8	309 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	SGK494	Q96LW2	274 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	OTOR	Q9NRC9	128 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	ONECUT1	Q9UBC0	465 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	RPH3AL	Q9UNE2	315 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	PAM16	Q9Y3D7	125 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	FLNA	P21333	2647 aa	Known RBP	13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	CR1	P17927	2039 aa		13.75	□□□□□ -0.21
FAM3A-222	ENST00000621967	IGHV2-70D	A0A0C4DH43	119 aa		13.74	□□□□□ -0.21
FAM3A-222	ENST00000621967	HOXB4	P17483	251 aa	Predicted RBP	13.74	□□□□□ -0.21
FAM3A-222	ENST00000621967	LYZ	P61626	148 aa		13.74	□□□□□ -0.21
FAM3A-222	ENST00000621967	TMEM190	Q8WZ59	177 aa		13.74	□□□□□ -0.21

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