RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 C8orf49Q96NF6 230 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 RSG1Q9BU20 258 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 SLC25A39Q9BZJ4 359 aaPredicted RBP1.48□□□□□ -2.17
CPNE3-211ENST00000621526 SLC5A7Q9GZV3 580 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 AMBNQ9NP70 447 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 PLAC8Q9NZF1 115 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 CACFD1Q9UGQ2 172 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 TP53TG3Q9ULZ0 132 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 DIMT1Q9UNQ2 313 aaKnown RBP1.48□□□□□ -2.17
CPNE3-211ENST00000621526 ARL2BPQ9Y2Y0 163 aa1.48□□□□□ -2.17
CPNE3-211ENST00000621526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.48□□□□□ -2.17
CPNE3-211ENST00000621526 IGHV1OR15-1A0A075B7D0 117 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 TRGV1A0A0A0MS02 117 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 TRAV8-2A0A0B4J237 113 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 TRGV4A0A0C4DH28 118 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 EFCAB10A6NFE3 127 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 FABP12A6NFH5 140 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 EI24O14681 340 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 PHOX2AO14813 284 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 NMBP08949 121 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 UCHL1P09936 223 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CFC1BP0CG36 223 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 NAT1P18440 290 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 MYL12AP19105 171 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CXCL3P19876 107 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 GPX4P36969 197 aaPredicted RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 GYS2P54840 703 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 TCL1AP56279 114 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 KLF9Q13886 244 aaPredicted RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 FLOT2Q14254 428 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 ELOBQ15370 118 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 AARDQ4LEZ3 155 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 OR10J3Q5JRS4 329 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 AADACL3Q5VUY0 350 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 GGNBP1Q5YKI7 109 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 LPCAT3Q6P1A2 487 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CCDC190Q86UF4 302 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 FAM219AQ8IW50 185 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 EIF4E3Q8N5X7 224 aaKnown RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CLRN3Q8NCR9 226 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 BPIFB6Q8NFQ5 453 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 OR10G4Q8NGN3 311 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 OR51H1Q8NH63 302 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 Q8TAT8 98 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 ZNF431Q8TF32 576 aaPredicted RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 NPIPB3Q92617 1050 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CENPNQ96H22 339 aaPredicted RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 TMEM80Q96HE8 168 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 ODF3Q96PU9 254 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 CCDC90BQ9GZT6 254 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 GTSF1LQ9H1H1 148 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 PLGRKTQ9HBL7 147 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 C8orf4Q9NR00 106 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 GSN-AS1Q9NRJ2 163 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 RRP15Q9Y3B9 282 aaKnown RBP1.47□□□□□ -2.17
CPNE3-211ENST00000621526 KLF12Q9Y4X4 402 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 KIF25-AS1Q9Y6Z4 181 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 V9GY05 133 aa1.47□□□□□ -2.17
CPNE3-211ENST00000621526 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 A0A087WWC5 75 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM272A0A1B0GTI8 110 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 CASQ2O14958 399 aaPredicted RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 CCNKO75909 580 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ARL6IP5O75915 188 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SCGNO76038 276 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ATG12O94817 140 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 NXPH3O95157 252 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-30P01768 117 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-33P01772 117 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SLC25A5P05141 298 aaKnown RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 CLEC2LP0C7M8 214 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-30-3P0DP02 117 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-30-5P0DP03 117 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 FCGR1AP12314 374 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 S100GP29377 79 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 CBX5P45973 191 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 RFX2P48378 723 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 PPT1P50897 306 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 RND2P52198 227 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SPCS3P61009 180 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 PRR3P79522 188 aaKnown RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 HIST1H1AQ02539 215 aaPredicted RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 Q0VG73 95 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 GUK1Q16774 197 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 VWC2Q2TAL6 325 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 HSP90B2PQ58FF3 399 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 GFI1BQ5VTD9 330 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 TEPPQ6URK8 271 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 Q6ZRP5 223 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SPATA24Q86W54 205 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 HOGA1Q86XE5 327 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ARL6IP6Q8N6S5 226 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SLC35G3Q8N808 338 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF738Q8NE65 137 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF555Q8NEP9 628 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 BPIFCQ8NFQ6 507 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 BEST4Q8NFU0 473 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 OR5AP2Q8NGF4 316 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms