RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 UQCC3Q6UW78 93 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 MYOZ3Q8TDC0 251 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 UBE2E2Q96LR5 201 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 JMJD8Q96S16 334 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 RNF2Q99496 336 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
CBWD3-216ENST00000621396 APOC3P02656 99 aa12.19□□□□□ -0.46
CBWD3-216ENST00000621396 RNF114Q9Y508 228 aa12.19□□□□□ -0.46
CBWD3-216ENST00000621396 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
CBWD3-216ENST00000621396 SRP19P09132 144 aaKnown RBP12.19□□□□□ -0.46
CBWD3-216ENST00000621396 S100A1P23297 94 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
CBWD3-216ENST00000621396 C8orf86Q6ZUL3 223 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 CITED2Q99967 270 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-216ENST00000621396 ZNF586Q9NXT0 402 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 TMEM89A2RUT3 159 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 GGTLC3B5MD39 225 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 IFNA1P01562 189 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 LGALS1P09382 135 aaKnown RBP12.18□□□□□ -0.46
CBWD3-216ENST00000621396 NBEAP1P0C6P0 100 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 SLC35B3Q9H1N7 401 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 MANBALQ9NQG1 85 aa12.18□□□□□ -0.46
CBWD3-216ENST00000621396 NPPCP23582 126 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 SYNJ2BPP57105 145 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 GUCA2BQ16661 112 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 IGFL4Q6B9Z1 124 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-216ENST00000621396 TRRAPQ9Y4A5 3859 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 VWFP04275 2813 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 BUB3O43684 328 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 SLURP1P55000 103 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
CBWD3-216ENST00000621396 METTL26Q96S19 204 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 C16orf95Q9H693 158 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
CBWD3-216ENST00000621396 IGKV3-7A0A075B6H7 116 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 SLC17A3O00476 420 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 NDUFA4O00483 81 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 EXOC3-AS1Q8N2X6 119 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 SCO1O75880 301 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 ZP3P21754 424 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-216ENST00000621396 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 SMAD5-AS1Q9Y6J3 95 aa12.16□□□□□ -0.46
CBWD3-216ENST00000621396 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
CBWD3-216ENST00000621396 CDX1P47902 265 aaPredicted RBP12.15□□□□□ -0.46
CBWD3-216ENST00000621396 ATP6V0BQ99437 205 aa12.15□□□□□ -0.46
CBWD3-216ENST00000621396 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
CBWD3-216ENST00000621396 KRBOX1C9JBD0 128 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 NDUFB4O95168 129 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 CRYBB3P26998 211 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 KRTAP10-3P60369 221 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 GNG5P63218 68 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 SOHLH1Q5JUK2 328 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 SGK494Q96LW2 274 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 LINC00479Q96M42 142 aa12.15□□□□□ -0.47
CBWD3-216ENST00000621396 IGLC2P0DOY2 106 aa12.14□□□□□ -0.47
CBWD3-216ENST00000621396 PROK1P58294 105 aa12.14□□□□□ -0.47
CBWD3-216ENST00000621396 PMS2P11Q13670 270 aa12.14□□□□□ -0.47
CBWD3-216ENST00000621396 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
CBWD3-216ENST00000621396 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
CBWD3-216ENST00000621396 STXBP6Q8NFX7 210 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 SUN5Q8TC36 379 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-216ENST00000621396 PGPA6NDG6 321 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-216ENST00000621396 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
CBWD3-216ENST00000621396 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
CBWD3-216ENST00000621396 C4orf3Q8WVX3 66 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
CBWD3-216ENST00000621396 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 NDUFA7O95182 113 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 RPL11P62913 178 aaKnown RBP12.12□□□□□ -0.47
CBWD3-216ENST00000621396 CCDC28AQ8IWP9 274 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 PARLQ9H300 379 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 Q9H3A6 140 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
CBWD3-216ENST00000621396 M0R3E3 92 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 GPHB5Q86YW7 130 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 RHPN1-AS1Q9BWJ2 59 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 A0A1W2PRE2 83 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 RPL7P18124 248 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms