RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PPBPP02775 128 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 CFHR2P36980 270 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 ZNF138P52744 262 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 DEFB113Q30KQ7 82 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 ORMDL2Q53FV1 153 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 TTC9CQ8N5M4 171 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 OR5A1Q8NGJ0 315 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 TMEM190Q8WZ59 177 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 SLC25A39Q9BZJ4 359 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 U3KQA8 63 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV2-40A0A087WW87 121 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV2D-40P01614 121 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 CD55P08174 381 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 RNF182Q8N6D2 247 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 CLDN16Q9Y5I7 305 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 NDUFA3O95167 84 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 MST1LQ2TV78 715 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 NOTCH3Q9UM47 2321 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 DOCK4Q8N1I0 1966 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV1D-8A0A087WSZ0 117 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 ADMP35318 185 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 EFNB3Q15768 340 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 MRAPQ8TCY5 172 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 TRGV9Q99603 122 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 SCRT1Q9BWW7 348 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 JPT2Q9H910 190 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.97□□□□□ -1.138e-7■■■□□ 16.8
CLTCL1-211ENST00000621271 SIP14410 1827 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 IZUMO1RA6ND01 250 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 LINC00158P58513 81 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 DOCK7Q96N67 2140 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 ANK1P16157 1881 aa7.97□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV1-27A0A075B6S5 117 aa7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 C11orf68Q9H3H3 251 aaKnown RBP7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 WDR83OSQ9Y284 106 aa7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 CGB3P0DN86 165 aa7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 ZNF562Q6V9R5 426 aa7.96□□□□□ -1.13
CLTCL1-211ENST00000621271 ATP6V0E1O15342 81 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 XCL2Q9UBD3 114 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 HOXA3O43365 443 aaPredicted RBP7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 APOMO95445 188 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 FAM19A2Q8N3H0 131 aa7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 PHLDA1Q8WV24 401 aaPredicted RBP7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 MRPL16Q9NX20 251 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-211ENST00000621271 WNK2Q9Y3S1 2297 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 LYL1P12980 280 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 PLA2G5P39877 138 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 LHFPL4Q7Z7J7 247 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 SRSF8Q9BRL6 282 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 KLF2Q9Y5W3 355 aaPredicted RBP7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 COQ2Q96H96 371 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 MED12Q93074 2177 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 TRAV9-2A0A087WT02 112 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 TRAV5A0A0B4J249 113 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 TTC32Q5I0X7 151 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-211ENST00000621271 CA1P00915 261 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 CGB7P0DN87 165 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 Q8TCH9 128 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 C1orf194Q5T5A4 169 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 FOXL1Q12952 345 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 EXOC3-AS1Q8N2X6 119 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 ST6GALNAC6Q969X2 333 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 PNRC2Q9NPJ4 139 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 KIF26BQ2KJY2 2108 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 HAPLN4Q86UW8 402 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 DMRTC2Q8IXT2 367 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 C1orf159Q96HA4 380 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 FAM215AQ9Y5M1 114 aa7.94□□□□□ -1.14
CLTCL1-211ENST00000621271 A0A0U1RRA0 63 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 A0A1B0GV72 72 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 TOMM40O96008 361 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 NAPSAO96009 420 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 FAM90A2PQ658T7 463 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 Q6P435 159 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 KLHDC3Q9BQ90 382 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 DLEU1O43261 78 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 SEC11AP67812 179 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 SS18Q15532 418 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 VSIRQ9H7M9 311 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 F8WEM9 126 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 EVI2AP22794 236 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 PLNP26678 52 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 ERCC8Q13216 396 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 TMEM249Q2WGJ8 235 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms