RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TCRAP04437 139 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-208ENST00000618395 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 DEFB125Q8N687 156 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 FAM60AQ9NP50 221 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 C10orf91Q5T1B1 145 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 C1QL2Q7Z5L3 287 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 KIR2DL5BA0A0G2JN68 375 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 KIR2DL5BA0A0G2JPC4 375 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 C8orf86Q6ZUL3 223 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 DTX1Q86Y01 620 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 KIR2DL5AQ8N109 375 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 F6UB75 175 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 WISP3O95389 354 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-208ENST00000618395 NPYP01303 97 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 CCL3P10147 92 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 DTX4Q9Y2E6 619 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 TNRC6BQ9UPQ9 1833 aaKnown RBP12.47□□□□□ -0.41
COL5A1-208ENST00000618395 NMSQ5H8A3 153 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 IGHV3-23P01764 117 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 ZFP36L2P47974 494 aaKnown RBP12.47□□□□□ -0.41
COL5A1-208ENST00000618395 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
COL5A1-208ENST00000618395 SAP30O75446 220 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
COL5A1-208ENST00000618395 TMEM54Q969K7 222 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 IGLC7A0M8Q6 106 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 TRGV3P03979 118 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 VDAC2P45880 294 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-208ENST00000618395 C6orf226Q5I0X4 101 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-208ENST00000618395 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 FOXC1Q12948 553 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 ERCC8Q13216 396 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 LGALS9BQ3B8N2 356 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 LGALS9CQ6DKI2 356 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 BMPERQ8N8U9 685 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 ZNF721Q8TF20 911 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 SIGLEC8Q9NYZ4 499 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
COL5A1-208ENST00000618395 LY6G5BQ8NDX9 201 aa12.46□□□□□ -0.42
COL5A1-208ENST00000618395 WFDC9Q8NEX5 89 aa12.46□□□□□ -0.42
COL5A1-208ENST00000618395 CLPSL1A2RUU4 121 aa12.46□□□□□ -0.42
COL5A1-208ENST00000618395 DTX2Q86UW9 622 aa12.46□□□□□ -0.42
COL5A1-208ENST00000618395 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
COL5A1-208ENST00000618395 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
COL5A1-208ENST00000618395 C12orf74Q32Q52 190 aa12.45□□□□□ -0.42
COL5A1-208ENST00000618395 RSPO2Q6UXX9 243 aaPredicted RBP12.45□□□□□ -0.42
COL5A1-208ENST00000618395 LILRA1O75019 489 aa12.45□□□□□ -0.42
COL5A1-208ENST00000618395 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
COL5A1-208ENST00000618395 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-208ENST00000618395 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 NTN5Q8WTR8 489 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-208ENST00000618395 ADAMTSL3P82987 1691 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 TRAV13-2A0A0B4J235 113 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 KLF14Q8TD94 323 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-208ENST00000618395 RS1O15537 224 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 KLF5Q13887 457 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-208ENST00000618395 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 CTHRC1Q96CG8 243 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 PLXNB3Q9ULL4 1909 aa12.44□□□□□ -0.42
COL5A1-208ENST00000618395 CRYBA2P53672 197 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 CHCHD5Q9BSY4 110 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 IGHV1OR21-1A0A087WYE8 117 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 LOC101059948A0A1B0GTJ6 334 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 ACP7Q6ZNF0 438 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 SLC25A16P16260 332 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 RIF1Q5UIP0 2472 aaKnown RBP12.43□□□□□ -0.42
COL5A1-208ENST00000618395 C12orf77C9JDV5 145 aa12.43□□□□□ -0.42
COL5A1-208ENST00000618395 S4R3C0 116 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 ZNF474Q6S9Z5 364 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-208ENST00000618395 EXOC3-AS1Q8N2X6 119 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 TMEM141Q96I45 108 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 TMEM196Q5HYL7 178 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 LINC01465Q8N7H1 131 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 IMMP1LQ96LU5 166 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 C2orf16Q68DN1 1984 aa12.42□□□□□ -0.42
COL5A1-208ENST00000618395 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
COL5A1-208ENST00000618395 IFI6P09912 130 aa12.41□□□□□ -0.42
COL5A1-208ENST00000618395 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
COL5A1-208ENST00000618395 SMKR1H3BMG3 65 aa12.41□□□□□ -0.42
COL5A1-208ENST00000618395 ZNRF1Q8ND25 227 aa12.41□□□□□ -0.42
COL5A1-208ENST00000618395 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
COL5A1-208ENST00000618395 CLEC19AQ6UXS0 136 aa12.4□□□□□ -0.42
COL5A1-208ENST00000618395 TAX1BP3O14907 124 aa12.4□□□□□ -0.42
COL5A1-208ENST00000618395 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
COL5A1-208ENST00000618395 PSMB8P28062 276 aa12.4□□□□□ -0.42
COL5A1-208ENST00000618395 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms