RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 BPIFA4PQ86YQ2 179 aa13.52□□□□□ -0.25
PCDHGC3-205ENST00000617641 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
PCDHGC3-205ENST00000617641 C17orf77Q96MU5 243 aa13.52□□□□□ -0.25
PCDHGC3-205ENST00000617641 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
PCDHGC3-205ENST00000617641 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
PCDHGC3-205ENST00000617641 FOXL1Q12952 345 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 C5orf17Q8NAS9 161 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 SGK494Q96LW2 274 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 TRAV41A0A0B4J266 112 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 UBE2CO00762 179 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 TGFAP01135 160 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 DEFB113Q30KQ7 82 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 V9GYV3 84 aa13.51□□□□□ -0.25
PCDHGC3-205ENST00000617641 IGHV3OR16-8A0A075B7F1 116 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 SCGB2A1O75556 95 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 TRGC1P0CF51 173 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 BAGE2Q86Y30 109 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 IL36BQ9NZH7 164 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 MRPS12O15235 138 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 CLEC3BP05452 202 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 NDUFA6P56556 154 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 TMEM183BQ1AE95 376 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 ZNF414Q96IQ9 312 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 CCDC140Q96MF4 163 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 ATG101Q9BSB4 218 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 OTORQ9NRC9 128 aa13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 BEX4Q9NWD9 120 aaPredicted RBP13.5□□□□□ -0.25
PCDHGC3-205ENST00000617641 TRBV19A0A075B6N1 114 aa13.49□□□□□ -0.25
PCDHGC3-205ENST00000617641 ZNF320A2RRD8 509 aa13.49□□□□□ -0.25
PCDHGC3-205ENST00000617641 TYMSP04818 313 aa13.49□□□□□ -0.25
PCDHGC3-205ENST00000617641 UBE2G1P62253 170 aa13.49□□□□□ -0.25
PCDHGC3-205ENST00000617641 ABCA12Q86UK0 2595 aa13.49□□□□□ -0.25
PCDHGC3-205ENST00000617641 TCRAP04437 139 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 CRIP2P52943 208 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 LOXL1Q08397 574 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 Q5PR19 223 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 S100A7AQ86SG5 101 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 KLF12Q9Y4X4 402 aa13.48□□□□□ -0.25
PCDHGC3-205ENST00000617641 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 GNB4Q9HAV0 340 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 BLCAPP62952 87 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 RPEL1Q2QD12 228 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 RABAC1Q9UI14 185 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 CHD6Q8TD26 2715 aa13.47□□□□□ -0.25
PCDHGC3-205ENST00000617641 ZANQ9Y493 2812 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 J3QLI3 93 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 SMIM6P0DI80 62 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 TOMM20LQ6UXN7 152 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 SIGLEC15Q6ZMC9 328 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 Q6ZS46 218 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 NOL4LQ96MY1 436 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 RNF24Q9Y225 148 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 TENM4Q6N022 2769 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 CR1P17927 2039 aa13.46□□□□□ -0.25
PCDHGC3-205ENST00000617641 CSPG4Q6UVK1 2322 aa13.46□□□□□ -0.26
PCDHGC3-205ENST00000617641 IGHG2P01859 326 aa13.46□□□□□ -0.26
PCDHGC3-205ENST00000617641 PRB4P10163 310 aaPredicted RBP13.46□□□□□ -0.26
PCDHGC3-205ENST00000617641 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.26
PCDHGC3-205ENST00000617641 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.26
PCDHGC3-205ENST00000617641 TRBV7-1A0A0A6YYK4 115 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 BMPR1BO00238 502 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 IGF1P05019 195 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 RPL15P61313 204 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 ATP5G2Q06055 141 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 FMC1Q96HJ9 113 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 NAV2Q8IVL1 2488 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 TRAV8-1A0A0A6YYK1 113 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 M0QZK8 103 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 TRGV3P03979 118 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 HIST2H2BCQ6DN03 193 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 GOLT1AQ6ZVE7 132 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 OR8I2Q8N0Y5 310 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 BTF3L4Q96K17 158 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 GPR82Q96P67 336 aa13.45□□□□□ -0.26
PCDHGC3-205ENST00000617641 IGHV4-59P01825 116 aa13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 GAR1Q9NY12 217 aaKnown RBP13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 KMT2BQ9UMN6 2715 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 ZNF705GA8MUZ8 300 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 HOXA5P20719 270 aa13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 TCL1AP56279 114 aa13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 Q96MF0 132 aa13.44□□□□□ -0.26
PCDHGC3-205ENST00000617641 FAM223BA6NKX1 122 aa13.43□□□□□ -0.26
PCDHGC3-205ENST00000617641 LTAP01374 205 aa13.43□□□□□ -0.26
PCDHGC3-205ENST00000617641 S100A9P06702 114 aaKnown RBP13.43□□□□□ -0.26
PCDHGC3-205ENST00000617641 FAM223AQ8IWN6 122 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms