RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 C19orf24Q9BVV8 132 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 THYN1Q9P016 225 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 A6NDX4 124 aa6.06□□□□□ -1.44
NEK3-207ENST00000617054 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
NEK3-207ENST00000617054 ZNF48Q96MX3 618 aaPredicted RBP6.06□□□□□ -1.44
NEK3-207ENST00000617054 MRPL32Q9BYC8 188 aaKnown RBP6.06□□□□□ -1.44
NEK3-207ENST00000617054 MRPL27Q9P0M9 148 aaKnown RBP6.06□□□□□ -1.44
NEK3-207ENST00000617054 HELTA6NFD8 242 aa6.06□□□□□ -1.44
NEK3-207ENST00000617054 FAM110DQ8TAY7 271 aaPredicted RBP6.06□□□□□ -1.44
NEK3-207ENST00000617054 ZNF586Q9NXT0 402 aa6.06□□□□□ -1.44
NEK3-207ENST00000617054 MLXQ9UH92 298 aa6.06□□□□□ -1.44
NEK3-207ENST00000617054 SLC17A3O00476 420 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 GP9P14770 177 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 RPS10P46783 165 aaKnown RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 C15orf54Q8N8G6 183 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 TRAV8-1A0A0A6YYK1 113 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 TRGV3P03979 118 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 RAB5AP20339 215 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 CENPWQ5EE01 88 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 OR1L6Q8NGR2 347 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 RNASE7Q9H1E1 156 aaKnown RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 PCP4L1A6NKN8 68 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 F6UZH7 168 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 ISLRO14498 428 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 TSPAN9O75954 239 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 TOMM40O96008 361 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 SLC25A5P05141 298 aaKnown RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 MGST1P10620 155 aaKnown RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 TPPP2P59282 170 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 PNRC1Q12796 327 aaPredicted RBP6.05□□□□□ -1.44
NEK3-207ENST00000617054 ZNF502Q8TBZ5 544 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 ZNF414Q96IQ9 312 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 YPEL4Q96NS1 127 aa6.05□□□□□ -1.44
NEK3-207ENST00000617054 TRBV9A0A0B4J1U6 114 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 ZNF98A6NK75 572 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 CLDN34H7C241 214 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 GATA3P23771 443 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 IER3P46695 156 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 CDPF1Q6NVV7 123 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 CDC42EP3Q9UKI2 254 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
NEK3-207ENST00000617054 A0A1W2PPQ1 181 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 A0A1W2PRE2 83 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 WI2-2373I1.2A0A1W2PRP0 233 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 CA1P00915 261 aaPredicted RBP6.04□□□□□ -1.44
NEK3-207ENST00000617054 MT-ND4LP03901 98 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 PLP1P60201 277 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 PRR27Q6MZM9 219 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 TOMM20LQ6UXN7 152 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 C1QL4Q86Z23 238 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 RNF2Q99496 336 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 Q9H3A6 140 aa6.04□□□□□ -1.44
NEK3-207ENST00000617054 A0A087WWC5 75 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 H7BYZ3 331 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 M0R3E3 92 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 SPINK4O60575 86 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 GALR1P47211 349 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 GNG4P50150 75 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 SMR3AQ99954 134 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 SHANK2-AS3Q9BTD1 123 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 TUBA4BQ9H853 241 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 IGHG2P01859 326 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 HLA-DMBP28068 263 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 PPIFP30405 207 aaKnown RBP6.03□□□□□ -1.44
NEK3-207ENST00000617054 SLC35B1P78383 322 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 ATP5G2Q06055 141 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 PRR31Q5SQ13 230 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 CYB5R2Q6BCY4 276 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 SFRP2Q96HF1 295 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 C16orf92Q96LL3 132 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 B4DEV8 164 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 H3BRN7 92 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 TRGC2P03986 189 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 FRMD6-AS1P0C7T7 363 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 ERVFC1-1P60608 527 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 YPEL3P61236 119 aaPredicted RBP6.03□□□□□ -1.44
NEK3-207ENST00000617054 LRRC75A-AS1Q8N1F1 130 aa6.03□□□□□ -1.44
NEK3-207ENST00000617054 SORL1Q92673 2214 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 TRAV30A0A087WSZ9 112 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 PEX7O00628 323 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 UNQ9165/PRO28630Q6UXU0 137 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 BPIFA4PQ86YQ2 179 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 OR8I2Q8N0Y5 310 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 PITPNC1Q9UKF7 332 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 EPDR1Q9UM22 224 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 IGLV2-8P01709 118 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 MYCNOSP40205 109 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 C19orf54Q5BKX5 351 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 TEX38Q6PEX7 206 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 FAM210BQ96KR6 192 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 TXNDC17Q9BRA2 123 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 SERTAD4Q9NUC0 356 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 SMAD5-AS1Q9Y6J3 95 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 WNK1Q9H4A3 2382 aa6.02□□□□□ -1.45
NEK3-207ENST00000617054 IGKV3-7A0A075B6H7 116 aa6.01□□□□□ -1.45
NEK3-207ENST00000617054 ZNF320A2RRD8 509 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 665.8 ms