RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 DKK4Q9UBT3 224 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 FANCMQ8IYD8 2048 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 COL8A2P25067 703 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 SAP30O75446 220 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 IGKCP01834 107 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 ZNF329Q86UD4 541 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 TMEM101Q96IK0 257 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 ZNF492Q9P255 531 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 RFNGQ9Y644 331 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 IGLV1-44P01699 117 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 DMRTA2Q96SC8 542 aa11.96□□□□□ -0.5
SNPH-203ENST00000614659 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 Q0VG73 95 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 PDE6HQ13956 83 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 C5orf64Q2M2E5 130 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 C5orf24Q7Z6I8 188 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 LINC00311Q8N616 119 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 WIPF3A6NGB9 483 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 LTBP2Q14767 1821 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
SNPH-203ENST00000614659 A8MWV9 139 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 C9JQL5 133 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 GZMBP10144 247 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
SNPH-203ENST00000614659 CT83Q5H943 113 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 LIME1Q9H400 295 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 DKK1O94907 266 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 PSG3Q16557 428 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 IGHV3OR16-13A0A075B7E8 117 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 IGHV3-74A0A0B4J1X5 117 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 SIGLEC15Q6ZMC9 328 aa11.94□□□□□ -0.5
SNPH-203ENST00000614659 TEX36Q5VZQ5 186 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 KIR3DL3Q8N743 410 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 NUP35Q8NFH5 326 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 IFI27L1Q96BM0 104 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 ALPK2Q86TB3 2170 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
SNPH-203ENST00000614659 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 C1QTNF4Q9BXJ3 329 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
SNPH-203ENST00000614659 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 C9orf139Q6ZV77 190 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGHV1-69DA0A0B4J2H0 117 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGHV2-70DA0A0C4DH43 119 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 DMRTC2Q8IXT2 367 aaPredicted RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 TDGF1P3P51864 188 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 CKS1BP61024 79 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 PMS2P5A8MQ11 134 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 RBMY1A1P0DJD3 496 aaKnown RBP11.92□□□□□ -0.5
SNPH-203ENST00000614659 RBMY1CP0DJD4 496 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 ZNF664Q8N3J9 261 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
SNPH-203ENST00000614659 PAX2Q02962 417 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 LYPD6Q86Y78 171 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 SHANK2-AS3Q9BTD1 123 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 C15orf65H3BRN8 121 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 FAM215AQ9Y5M1 114 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
SNPH-203ENST00000614659 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 Q6ZR03 302 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 Q86TA4 180 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
SNPH-203ENST00000614659 ZNF815PA8K554 130 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 CNTFRP26992 372 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 KLRD1Q13241 179 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 ESDP10768 282 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 POU2AF1Q16633 256 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 SFTA2Q6UW10 78 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
SNPH-203ENST00000614659 SAA4P35542 130 aa11.9□□□□□ -0.5
SNPH-203ENST00000614659 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms