RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 DYSFO75923 2080 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 A0A0G2JNJ9 132 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 LY6HO94772 140 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 S100A7P31151 101 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
MSH6-213ENST00000614496 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 RITA1Q96K30 269 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 Q9UFV3 132 aa10.09□□□□□ -0.79
MSH6-213ENST00000614496 TIMM23O14925 209 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 LINC00173Q6ZV60 143 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 IGHV2-26A0A0B4J1V2 119 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 MFAP4P55083 255 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 FAM169BQ8N8A8 192 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 C1orf159Q96HA4 380 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
MSH6-213ENST00000614496 K7EM74 188 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 PPIFP30405 207 aaKnown RBP10.08□□□□□ -0.8
MSH6-213ENST00000614496 LDLRAD2Q5SZI1 272 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 IGFL4Q6B9Z1 124 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 AMMECR1LQ6DCA0 310 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 TRGV9Q99603 122 aa10.08□□□□□ -0.8
MSH6-213ENST00000614496 SOX21Q9Y651 276 aaPredicted RBP10.08□□□□□ -0.8
MSH6-213ENST00000614496 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 LINC00310P59036 64 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 RAB1BQ9H0U4 201 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
MSH6-213ENST00000614496 TOMM40O96008 361 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 FRYLO94915 3013 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 A6NDN8 102 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 GCSHP23434 173 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
MSH6-213ENST00000614496 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
MSH6-213ENST00000614496 GPR183P32249 361 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 C22orf34Q6ZV56 151 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 CHCHD1Q96BP2 118 aaKnown RBP10.07□□□□□ -0.8
MSH6-213ENST00000614496 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
MSH6-213ENST00000614496 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.06□□□□□ -0.8
MSH6-213ENST00000614496 NCR2O95944 276 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 UBE2V1Q13404 147 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 FAM231DQ6ZW35 169 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
MSH6-213ENST00000614496 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 DSCAMO60469 2012 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 ZNF207O43670 478 aaKnown RBP10.06□□□□□ -0.8
MSH6-213ENST00000614496 CGB3P0DN86 165 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 CGB7P0DN87 165 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 CACNG7P62955 275 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 Q86TA4 180 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
MSH6-213ENST00000614496 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
MSH6-213ENST00000614496 ZNF414Q96IQ9 312 aa10.06□□□□□ -0.8
MSH6-213ENST00000614496 LOXP28300 417 aaPredicted RBP10.05□□□□□ -0.8
MSH6-213ENST00000614496 C17orf77Q96MU5 243 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 DPM3Q9P2X0 92 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 C22orf46C9J442 243 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 D6R8Y8 96 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 CCL21O00585 134 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 Q6ZS92 163 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 Q8TAT8 98 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 MRPS16Q9Y3D3 137 aaKnown RBP10.05□□□□□ -0.8
MSH6-213ENST00000614496 C7orf71A4D174 169 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 B9A039 149 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 SMKR1H3BMG3 65 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 K7ERU9 68 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 KLRD1Q13241 179 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 PET117Q6UWS5 81 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 CTSZQ9UBR2 303 aa10.05□□□□□ -0.8
MSH6-213ENST00000614496 ESDP10768 282 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 GDF5OSQ5U4N7 250 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 A0A1B0GWJ7 208 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 CR1LQ2VPA4 569 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 RPL7P18124 248 aaKnown RBP10.04□□□□□ -0.8
MSH6-213ENST00000614496 TEX36Q5VZQ5 186 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 ORMDL3Q8N138 153 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 C21orf62Q9NYP8 219 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
MSH6-213ENST00000614496 GAGE1Q13065 139 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 KLK15Q9H2R5 256 aa10.04□□□□□ -0.8
MSH6-213ENST00000614496 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 A1L4Q6 167 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 H3BUT2 72 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 BMI1P35226 326 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 IFI27P40305 119 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms