RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 HGFACQ04756 655 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 ZNF876PQ49A33 203 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 OCIAD2Q56VL3 154 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 EXOC3-AS1Q8N2X6 119 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 CD24P25063 80 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 JPT2Q9H910 190 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 SIGLEC9Q9Y336 463 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 IGHG3P01860 377 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 ZNF492Q9P255 531 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 A0A087WX48 190 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 MYMXA0A1B0GTQ4 84 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 LYNX1G3V0Z9 82 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 LYNX1P0DP58 116 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 C10orf55Q5SWW7 151 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 DNAJC30Q96LL9 226 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 NAA38Q9BRA0 125 aaKnown RBP14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 CHAC1Q9BUX1 264 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 NCOR1P1Q9H4R4 102 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 CHD5Q8TDI0 1954 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 HEATR5BQ9P2D3 2071 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 INSP01308 110 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 LEPROTO15243 131 aa14.21□□□□□ -0.13
HMGXB3-206ENST00000613459 Q0VG73 95 aa14.21□□□□□ -0.14
HMGXB3-206ENST00000613459 LCN12Q6JVE5 192 aa14.21□□□□□ -0.14
HMGXB3-206ENST00000613459 COX11Q9Y6N1 276 aa14.21□□□□□ -0.14
HMGXB3-206ENST00000613459 NYNRINQ9P2P1 1898 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 LILRA1O75019 489 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 ZNF329Q86UD4 541 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 C15orf62A8K5M9 175 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 RPL15P61313 204 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 GAGE12BA1L429 117 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 SRRM4A7MD48 611 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 VWC2LB2RUY7 222 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 SLC25A16P16260 332 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 NTF4P34130 210 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 MST1LQ2TV78 715 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 CT83Q5H943 113 aa14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 ZCCHC24Q8N2G6 241 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 RNF166Q96A37 237 aaPredicted RBP14.2□□□□□ -0.14
HMGXB3-206ENST00000613459 RNASE2P10153 161 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 NPC2P61916 151 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 TMEM158Q8WZ71 300 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 GBF1Q92538 1859 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 IGHV2-5P01817 119 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 SPINK8P0C7L1 97 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 ADAMTSL5Q6ZMM2 481 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 GTSF1LQ9H1H1 148 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 A0A0U1RRA0 63 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 PAX4O43316 350 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 Q86TA4 180 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 SHANK2-AS3Q9BTD1 123 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 SNHG12Q9BXW3 62 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 EDA2RQ9HAV5 297 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 LAMTOR3Q9UHA4 124 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 NEGR1Q7Z3B1 354 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 SPANXDQ9BXN6 97 aa14.19□□□□□ -0.14
HMGXB3-206ENST00000613459 ERCC8Q13216 396 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 ASXL3Q9C0F0 2248 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 NDUFB8O95169 186 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 FOXG1P55316 489 aaPredicted RBP14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 TMEM249Q2WGJ8 235 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 C20orf144Q9BQM9 153 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 CSTL1Q9H114 145 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 GREB1Q4ZG55 1949 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 CD33P20138 364 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 B3GALT5-AS1P59052 145 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 TMEM75Q8N9X5 138 aa14.18□□□□□ -0.14
HMGXB3-206ENST00000613459 C9JQL5 133 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 SSC4DQ8WTU2 575 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 SAP30O75446 220 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 C10orf91Q5T1B1 145 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 TRAV3A0A0B4J244 114 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 LINC00473A8K010 186 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 LY6G5BQ8NDX9 201 aa14.17□□□□□ -0.14
HMGXB3-206ENST00000613459 NPSP0C0P6 89 aa14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 TIMM21Q9BVV7 248 aa14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 RHODO00212 210 aa14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 GATA3P23771 443 aa14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 PRB3Q04118 309 aaPredicted RBP14.16□□□□□ -0.14
HMGXB3-206ENST00000613459 IGKV1D-17A0A075B6S4 117 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 SELLP14151 372 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 TRPT1Q86TN4 253 aaKnown RBP14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 TRIOBPQ9H2D6 2365 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 ZC2HC1BQ5TFG8 222 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 ABCA7Q8IZY2 2146 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 TRGV1A0A0A0MS02 117 aa14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 ZNF474Q6S9Z5 364 aaPredicted RBP14.15□□□□□ -0.14
HMGXB3-206ENST00000613459 CDK2AP2O75956 126 aa14.15□□□□□ -0.15
HMGXB3-206ENST00000613459 YPEL3P61236 119 aaPredicted RBP14.15□□□□□ -0.15
HMGXB3-206ENST00000613459 BMPERQ8N8U9 685 aa14.15□□□□□ -0.15
HMGXB3-206ENST00000613459 DAZ1Q9NQZ3 744 aaKnown RBP14.15□□□□□ -0.15
HMGXB3-206ENST00000613459 TRAV8-3A0A0A6YYJ7 113 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 F8WEM9 126 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 Q0VFX4 171 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 H3BUX3 64 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 TMEM141Q96I45 108 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms