RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 LYPD1Q8N2G4 141 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 ANK1P16157 1881 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 IGKCP01834 107 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 LYZL1Q6UWQ5 148 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 IGHV3-64A0A075B6Q5 118 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 A0A0U1RRA0 63 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 IGKV1-16P04430 117 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 DEFB130BP0DP73 79 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 DEFB130AP0DP74 79 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 CHCHD1Q96BP2 118 aaKnown RBP16.37■□□□□ 0.21
CTDP1-208ENST00000613122 AKAP6Q13023 2319 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 ZSWIM8A7E2V4 1837 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 AGMATQ9BSE5 352 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 ZNF581Q9P0T4 197 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 RNASE2P10153 161 aaKnown RBP16.36■□□□□ 0.21
CTDP1-208ENST00000613122 ITGB1BP1O14713 200 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 GATA4P43694 442 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 QRFPP83859 136 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 FREM3P0C091 2139 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 NTF4P34130 210 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 SRSF3P84103 164 aaKnown RBP16.36■□□□□ 0.21
CTDP1-208ENST00000613122 COL6A6A6NMZ7 2263 aa16.36■□□□□ 0.21
CTDP1-208ENST00000613122 CFHR2P36980 270 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 NIT1Q86X76 327 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 A0A1B0GWB2 263 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 PAX2Q02962 417 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 C10orf126Q8N4M7 172 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 NCR2O95944 276 aa16.35■□□□□ 0.21
CTDP1-208ENST00000613122 PHLDA1Q8WV24 401 aaPredicted RBP16.34■□□□□ 0.21
CTDP1-208ENST00000613122 IFI27L1Q96BM0 104 aa16.34■□□□□ 0.21
CTDP1-208ENST00000613122 CD300EQ496F6 205 aaPredicted RBP16.34■□□□□ 0.21
CTDP1-208ENST00000613122 FGF16O43320 207 aa16.34■□□□□ 0.21
CTDP1-208ENST00000613122 CST9LQ9H4G1 147 aa16.34■□□□□ 0.21
CTDP1-208ENST00000613122 TICRRQ7Z2Z1 1910 aa16.34■□□□□ 0.21
CTDP1-208ENST00000613122 RIF1Q5UIP0 2472 aaKnown RBP16.33■□□□□ 0.21
CTDP1-208ENST00000613122 TEX43Q6ZNM6 134 aa16.33■□□□□ 0.21
CTDP1-208ENST00000613122 FOXL1Q12952 345 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 PLXNA3P51805 1871 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 D6R8Y8 96 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 TYMSP04818 313 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 PROK2Q9HC23 129 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 ZNRD1Q9P1U0 126 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 TCF20Q9UGU0 1960 aaKnown RBP16.33■□□□□ 0.2
CTDP1-208ENST00000613122 VCYO14598 125 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 JPT2Q9H910 190 aa16.33■□□□□ 0.2
CTDP1-208ENST00000613122 ERCC8Q13216 396 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 MYO7BQ6PIF6 2116 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 MGAMO43451 1857 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 A0A1W2PPI3 338 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 C15orf62A8K5M9 175 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 E9PQ18 207 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 LINC00587B1AMM8 73 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 LSM4Q9Y4Z0 139 aaKnown RBP16.32■□□□□ 0.2
CTDP1-208ENST00000613122 CACNA1DQ01668 2161 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 IGHV4-39P01824 125 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 AMBPP02760 352 aa16.32■□□□□ 0.2
CTDP1-208ENST00000613122 SIP14410 1827 aa16.31■□□□□ 0.2
CTDP1-208ENST00000613122 MCRIP2Q9BUT9 160 aaKnown RBP16.31■□□□□ 0.2
CTDP1-208ENST00000613122 ETV2O00321 342 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-208ENST00000613122 DEFB104AQ8WTQ1 72 aa16.31■□□□□ 0.2
CTDP1-208ENST00000613122 SHANK2-AS3Q9BTD1 123 aa16.31■□□□□ 0.2
CTDP1-208ENST00000613122 RPP25LQ8N5L8 163 aaKnown RBP16.31■□□□□ 0.2
CTDP1-208ENST00000613122 TRAV1-1A0A0B4J248 108 aa16.31■□□□□ 0.2
CTDP1-208ENST00000613122 C14orf178Q8N769 122 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-208ENST00000613122 REG4Q9BYZ8 158 aa16.31■□□□□ 0.2
CTDP1-208ENST00000613122 SEC11AP67812 179 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 C1orf122Q6ZSJ8 110 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 RASL10AQ92737 203 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 SLC25A2Q9BXI2 301 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 LINC01559Q495D7 138 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 SMPXQ9UHP9 88 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 SPCS1Q9Y6A9 102 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 FNDC10F2Z333 226 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 C1orf159Q96HA4 380 aa16.3■□□□□ 0.2
CTDP1-208ENST00000613122 LINC00518Q8N0U6 118 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 NHP2Q9NX24 153 aaKnown RBP16.29■□□□□ 0.2
CTDP1-208ENST00000613122 CLDN16Q9Y5I7 305 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 Q6ZR03 302 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 XCL2Q9UBD3 114 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 MLANAQ16655 118 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 DAD1P61803 113 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 FAM215AQ9Y5M1 114 aa16.29■□□□□ 0.2
CTDP1-208ENST00000613122 LMO1P25800 156 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 CSTL1Q9H114 145 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 NDUFB8O95169 186 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 HS3ST6Q96QI5 342 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 G3V318 75 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 IL17RELQ6ZVW7 336 aa16.28■□□□□ 0.2
CTDP1-208ENST00000613122 LOXP28300 417 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-208ENST00000613122 SS18Q15532 418 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 C6orf226Q5I0X4 101 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 ATRAIDQ6UW56 229 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 A0A087WWL8 130 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 PDE6HQ13956 83 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 C5orf30Q96GV9 206 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 DERL1Q9BUN8 251 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 F5H768 121 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 PAX4O43316 350 aa16.27■□□□□ 0.2
CTDP1-208ENST00000613122 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms