RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PRTN3P24158 256 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 AMTP48728 403 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 GPR82Q96P67 336 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 Q0VG73 95 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 C5orf17Q8NAS9 161 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF25P17030 456 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 WDR73Q6P4I2 378 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 ABCA2Q9BZC7 2435 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF785A8K8V0 405 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 OR2J3O76001 311 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 GPX1P07203 203 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 FOXA3P55318 350 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 PLP1P60201 277 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 NOL4LQ96MY1 436 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 KLF12Q9Y4X4 402 aa11.08□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 TRBV9A0A0B4J1U6 114 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGLV2-11P01706 119 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 SIGLECL1Q8N7X8 197 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 TSKUQ8WUA8 353 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 NDUFA3O95167 84 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 NDUFB8O95169 186 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 LTAP01374 205 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 BRS3P32247 399 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
PCDHGA3-202ENST00000612467 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 GNG7O60262 68 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 TOMM40O96008 361 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 MT-ND6P03923 174 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 ESDP10768 282 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 Q86TA4 180 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 ATOH7Q8N100 152 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 NPSP0C0P6 89 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 CEACAM3P40198 252 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 Q56UQ5 140 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 NPBQ8NG41 125 aa11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
PCDHGA3-202ENST00000612467 P01737 135 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 PAFAH1B2P68402 229 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 Q8N976 141 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 NEU4Q8WWR8 484 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 SHANK2-AS3Q9BTD1 123 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 BPESC1Q9GZL8 116 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 M0R1W7 72 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 GNLYP22749 145 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 LCN12Q6JVE5 192 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 NIT1Q86X76 327 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 RNF5Q99942 180 aa11.05□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 C19orf71A6NCJ1 209 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 H3BRN7 92 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 HLA-DRB1P01911 266 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 TMEM11P17152 192 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 PCP4P48539 62 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZFYVE26Q68DK2 2539 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 C1orf194Q5T5A4 169 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 CHRDL1Q9BU40 450 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
PCDHGA3-202ENST00000612467 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 COL8A1P27658 744 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 HLA-DMBP28068 263 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 PAX2Q02962 417 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 MAJINQ3KP22 176 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 MUC21A0A0G2JKD1 596 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 MUC21A0A140T8X8 626 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms