RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 M6PRP20645 277 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 SMCO1Q147U7 214 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 OR4D5Q8NGN0 318 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 OR1S1Q8NH92 325 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 AP3S1Q92572 193 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 TMEM147Q9BVK8 224 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 PGPEP1Q9NXJ5 209 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 ZNF586Q9NXT0 402 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 EXTL2Q9UBQ6 330 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 HSPB7Q9UBY9 170 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
CHMP4A-211ENST00000609024 AKR1C4P17516 323 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 ORM2P19652 201 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 HIST1H1AQ02539 215 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 BPIFCQ8NFQ6 507 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 RXFP4Q8TDU9 374 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
CHMP4A-211ENST00000609024 A0A0J9YY99 117 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 NCS1P62166 190 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
CHMP4A-211ENST00000609024 IFNA5P01569 189 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 VBP1P61758 197 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 Q5VSD8 79 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 FAAP20Q6NZ36 180 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
CHMP4A-211ENST00000609024 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 RLN2P04090 185 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 ERVFC1-1P60608 527 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 SSBP1Q04837 148 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 ESRGQ1W209 222 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 PRRT1Q99946 306 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-211ENST00000609024 A0A087WXM4 84 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 ATP6V1G2O95670 118 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 ANXA3P12429 323 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 LINC00315P59091 139 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 GPR132Q9UNW8 380 aa12.01□□□□□ -0.49
CHMP4A-211ENST00000609024 SNURFLB1AK76 121 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 H7BYZ3 331 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 AKAIN1P0CW23 69 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 RPL7P18124 248 aaKnown RBP12□□□□□ -0.49
CHMP4A-211ENST00000609024 CDKN1BP46527 198 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 RAP2BP61225 183 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 SRPXP78539 464 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 LYZL2Q7Z4W2 148 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
CHMP4A-211ENST00000609024 TRAV8-2A0A0B4J237 113 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 GAGE12BA1L429 117 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 GAGE7O76087 117 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 GAGE12FP0CL80 117 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 GAGE12GP0CL81 117 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 GAGE12IP0CL82 117 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 IAPPP10997 89 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 MRPS10P82664 201 aaKnown RBP11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 S100A7AQ86SG5 101 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 FUNDC2Q9BWH2 189 aa11.99□□□□□ -0.49
CHMP4A-211ENST00000609024 IGKV1OR2-108A0A075B7D4 117 aa11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 H3BNG1 76 aa11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 MED6O75586 246 aa11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 GATA2P23769 480 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 CLVS1Q8IUQ0 354 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
CHMP4A-211ENST00000609024 RGS5O15539 181 aa11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 OR51S1Q8NGJ8 323 aa11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 C17orf77Q96MU5 243 aa11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 CIB3Q96Q77 187 aaPredicted RBP11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 C20orf144Q9BQM9 153 aa11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 HIGD1AQ9Y241 93 aa11.97□□□□□ -0.49
CHMP4A-211ENST00000609024 SIVA1O15304 175 aa11.96□□□□□ -0.49
CHMP4A-211ENST00000609024 PSG3Q16557 428 aa11.96□□□□□ -0.49
CHMP4A-211ENST00000609024 C18orf15Q96N68 181 aa11.96□□□□□ -0.49
CHMP4A-211ENST00000609024 SMCO3A2RU48 225 aa11.95□□□□□ -0.5
CHMP4A-211ENST00000609024 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
CHMP4A-211ENST00000609024 IL5P05113 134 aa11.95□□□□□ -0.5
CHMP4A-211ENST00000609024 OR5G3P0C626 314 aa11.95□□□□□ -0.5
CHMP4A-211ENST00000609024 CXCL3P19876 107 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms