RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ATMQ13315 3056 aa11.71□□□□□ -0.53
CTCFL-219ENST00000608720 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 TCRAP04437 139 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 CEACAM3P40198 252 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 FAM120AOSQ5T036 256 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 RNASE6Q93091 150 aaKnown RBP11.71□□□□□ -0.54
CTCFL-219ENST00000608720 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.54
CTCFL-219ENST00000608720 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.54
CTCFL-219ENST00000608720 Q9H3A6 140 aa11.71□□□□□ -0.54
CTCFL-219ENST00000608720 SMG1Q96Q15 3661 aaKnown RBP11.7□□□□□ -0.54
CTCFL-219ENST00000608720 PLCE1Q9P212 2302 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 SEC11AP67812 179 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 SPATA12Q7Z6I5 190 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 TMEM191AQ9H0A3 160 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 FAM87AP0C7U9 286 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 LINC00322Q6ZN03 302 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-219ENST00000608720 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
CTCFL-219ENST00000608720 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 OR5AL1P0C617 328 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 TPRP12270 2363 aaKnown RBP11.69□□□□□ -0.54
CTCFL-219ENST00000608720 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
CTCFL-219ENST00000608720 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 DYNLRB1Q9NP97 96 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 JKAMPQ9P055 326 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
CTCFL-219ENST00000608720 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 TMEM14CQ9P0S9 112 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 F11RQ9Y624 299 aaKnown RBP11.68□□□□□ -0.54
CTCFL-219ENST00000608720 IGF2RP11717 2491 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 PGLYRP4Q96LB8 373 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 INSIG2Q9Y5U4 225 aa11.68□□□□□ -0.54
CTCFL-219ENST00000608720 IGHV3-21A0A0B4J1V1 117 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 SCGB1A1P11684 91 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 S100A7P31151 101 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 RBPJQ06330 500 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 ERASQ7Z444 233 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 CNTFRP26992 372 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 PPP1R27Q86WC6 154 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 NGBQ9NPG2 151 aa11.67□□□□□ -0.54
CTCFL-219ENST00000608720 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 H3BTX0 84 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 SMIM17P0DL12 118 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 APELAP0DMC3 54 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
CTCFL-219ENST00000608720 CACNA1AO00555 2505 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 KLK10O43240 276 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 GPR183P32249 361 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 BMI1P35226 326 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 LYZP61626 148 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 Q86TA4 180 aa11.66□□□□□ -0.54
CTCFL-219ENST00000608720 SLC25A39Q9BZJ4 359 aaPredicted RBP11.66□□□□□ -0.54
CTCFL-219ENST00000608720 SPENQ96T58 3664 aaKnown RBP11.65□□□□□ -0.54
CTCFL-219ENST00000608720 TRBV6-1A0A0K0K1D8 114 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 C7orf71A4D174 169 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 SHISA9B4DS77 424 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 E7EQL1 145 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 CHEK1O14757 476 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 SAP30O75446 220 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 COL8A1P27658 744 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 FOXA3P55318 350 aaPredicted RBP11.65□□□□□ -0.54
CTCFL-219ENST00000608720 CLEC5AQ9NY25 188 aa11.65□□□□□ -0.54
CTCFL-219ENST00000608720 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 H3BRM9 83 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 HAX1O00165 279 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 LEPROTL1O95214 131 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 RIPPLY3P57055 190 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 DPF1Q92782 380 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 LOC102724200A0A096LPH7 203 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-219ENST00000608720 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 I3L2K1 104 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 LIPFP07098 398 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 COX8AP10176 69 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 PSG3Q16557 428 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 RNF5Q99942 180 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 RASL11BQ9BPW5 248 aa11.64□□□□□ -0.55
CTCFL-219ENST00000608720 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
CTCFL-219ENST00000608720 C9orf118A6NHY6 69 aa11.63□□□□□ -0.55
CTCFL-219ENST00000608720 HOXB4P17483 251 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-219ENST00000608720 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
CTCFL-219ENST00000608720 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
CTCFL-219ENST00000608720 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
CTCFL-219ENST00000608720 SH3BGRL2Q9UJC5 107 aa11.63□□□□□ -0.55
CTCFL-219ENST00000608720 K7EP34 96 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms