RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MEOX1P50221 254 aa10.09□□□□□ -0.79
CTCFL-218ENST00000608440 KRTAP27-1Q3LI81 207 aa10.09□□□□□ -0.79
CTCFL-218ENST00000608440 OCIAD1Q9NX40 245 aa10.09□□□□□ -0.79
CTCFL-218ENST00000608440 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-218ENST00000608440 NDUFS7O75251 213 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 TFF1P04155 84 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 ZNF688P0C7X2 276 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 DUTP33316 252 aaKnown RBP10.08□□□□□ -0.8
CTCFL-218ENST00000608440 FOXF2Q12947 444 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 ITLN1Q8WWA0 313 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 PAXXQ9BUH6 204 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 SDK2Q58EX2 2172 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 SRD5A1P18405 259 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 COL8A1P27658 744 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 ERVK-16P61578 105 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 SRYQ05066 204 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 PRSS22Q9GZN4 317 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 RAB9BQ9NP90 201 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
CTCFL-218ENST00000608440 CSDC2Q9Y534 153 aaKnown RBP10.08□□□□□ -0.8
CTCFL-218ENST00000608440 A0A096LPE4 126 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 A0A1W2PPZ6 126 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 D6R8Y8 96 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 H3BTX0 84 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 HAX1O00165 279 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 SNCGO76070 127 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 HBDP02042 147 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 ZFP2Q6ZN57 461 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-218ENST00000608440 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-218ENST00000608440 PGPA6NDG6 321 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 SRXN1Q9BYN0 137 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 FBXL15Q9H469 300 aa10.07□□□□□ -0.8
CTCFL-218ENST00000608440 CENPVL3A0A0U1RRI6 287 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 PKIBQ9C010 78 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 HHLA3Q9XRX5 114 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 NTN3O00634 580 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-218ENST00000608440 PSPNO60542 156 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 CCL4P13236 92 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 C5orf47Q569G3 176 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 TEN1Q86WV5 123 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 WDR31Q8NA23 367 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 ASCL2Q99929 193 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 EPDR1Q9UM22 224 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-218ENST00000608440 A0A0J9YW62 118 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 WI2-2373I1.2A0A1W2PRP0 233 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 MPV17P39210 176 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-218ENST00000608440 Q6ZQT7 251 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 AAED1Q7RTV5 226 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-218ENST00000608440 PRDM14Q9GZV8 571 aa10.06□□□□□ -0.8
CTCFL-218ENST00000608440 PCSK5Q92824 1860 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 SRRM4A7MD48 611 aaKnown RBP10.05□□□□□ -0.8
CTCFL-218ENST00000608440 PRSS1P07477 247 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 SP1P08047 785 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 PCBD1P61457 104 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
CTCFL-218ENST00000608440 MLST8Q9BVC4 326 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 ZNF318Q5VUA4 2279 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 TMEM8BA6NDV4 472 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 PROP1O75360 226 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 IL4P05112 153 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 ZNF883P0CG24 379 aa10.05□□□□□ -0.8
CTCFL-218ENST00000608440 COL5A1P20908 1838 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-218ENST00000608440 FCN3O75636 299 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 IGHV3-48P01763 117 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-218ENST00000608440 SRSF12Q8WXF0 261 aaKnown RBP10.04□□□□□ -0.8
CTCFL-218ENST00000608440 LOC107984640A0A0U1RRK4 108 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 SMKR1H3BMG3 65 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-218ENST00000608440 HOXA3O43365 443 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-218ENST00000608440 COX7A2P2O60397 106 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 CT83Q5H943 113 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
CTCFL-218ENST00000608440 TRAV8-2A0A0B4J237 113 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 GLRXP35754 106 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 OTOGLQ3ZCN5 2332 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 TMEM30CPA0ZSE6 113 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 IGKCP01834 107 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 CD59P13987 128 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 PDPNQ86YL7 162 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 ANKRD29Q8N6D5 301 aa10.03□□□□□ -0.8
CTCFL-218ENST00000608440 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms