RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 OPN1SWP03999 348 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GZMBP10144 247 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 HIST1H1CP16403 213 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 CCL1P22362 96 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 PCBD1P61457 104 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ERVK11-1P61568 191 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 PPP1CBP62140 327 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ZNF117Q03924 483 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 LAGE3Q14657 143 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 LCN8Q6JVE9 175 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 C20orf196Q8IYI0 205 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ZNF664Q8N3J9 261 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 OR4S1Q8NGB4 309 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 BORCS7Q96B45 105 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SLC25A38Q96DW6 304 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 DERL3Q96Q80 235 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 TMEM70Q9BUB7 260 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SPANXA1Q9NS26 97 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 FUT9Q9Y231 359 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 RYR1P21817 5038 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 TMED7-TICAM2A0A0A6YYA0 188 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ZNF727A8MUV8 499 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 DNASE2O00115 360 aaPredicted RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 COX7A2P2O60397 106 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 UPK1BO75841 260 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GABARAPO95166 117 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 IFITM1P13164 125 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ZNF20P17024 532 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 HOXB6P17509 224 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 S100A4P26447 101 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 PRSS3P35030 304 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GRB2P62993 217 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ENDOGQ14249 297 aaKnown RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 DUSP5Q16690 384 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 VMA21Q3ZAQ7 101 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 KHDC3LQ587J8 217 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 TMEM69Q5SWH9 247 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 Q6YL49 198 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 ZNF584Q8IVC4 421 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SUMF2Q8NBJ7 301 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 OR4B1Q8NGF8 309 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SRXN1Q9BYN0 137 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 PROCRQ9UNN8 238 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SETD2Q9BYW2 2564 aaPredicted RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 DPM2O94777 84 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 PPP1R3DO95685 299 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 IGHV2-5P01817 119 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GKN3PP0CG01 181 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 FCER1GP30273 86 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 HOXD3P31249 432 aaPredicted RBP2.3□□□□□ -2.04
VCAM1-205ENST00000603679 OR1E2P47887 323 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 DGCR2P98153 550 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 FBXW12Q6X9E4 464 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 Q6ZSV7 163 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SLC36A1Q7Z2H8 476 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GAPTQ8N292 157 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 GABARAPL3Q9BY60 117 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 MED31Q9Y3C7 131 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 SPCS1Q9Y6A9 102 aa2.3□□□□□ -2.04
VCAM1-205ENST00000603679 A0A087WZ39 114 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 TRAV8-1A0A0A6YYK1 113 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 FAM24AA6NFZ4 105 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 TMEM262E9PQX1 116 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 CCDC179H3BU77 68 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SULT2B1O00204 365 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 NCBP2P52298 156 aaKnown RBP eCLIP2.29□□□□□ -2.04
VCAM1-205ENST00000603679 NANOS2P60321 138 aaKnown RBP2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SLC38A11Q08AI6 406 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 RTL8BQ17RB0 113 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SULT4A1Q9BR01 284 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 RTL8AQ9BWD3 113 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 TM2D1Q9BX74 207 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SH3BGRL3Q9H299 93 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 TAS2R5Q9NYW4 299 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 TAAR3PQ9P1P4 343 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 ERG28Q9UKR5 140 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 C5orf49A4QMS7 147 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 NCBP2LA6PVI3 153 aaKnown RBP2.29□□□□□ -2.04
VCAM1-205ENST00000603679 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SMKR1H3BMG3 65 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 J3QT63 122 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 CDC42EP2O14613 210 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 AMBPP02760 352 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 PFN2P35080 140 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 FBXW4P57775 412 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 LINC00310P59036 64 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 GUCA2BQ16661 112 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SLC25A48Q6ZT89 311 aaKnown RBP2.29□□□□□ -2.04
VCAM1-205ENST00000603679 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 SAXO1Q8IYX7 474 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 EXOC3-AS1Q8N2X6 119 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 OR1J4Q8NGS1 313 aa2.29□□□□□ -2.04
VCAM1-205ENST00000603679 DPY30Q9C005 99 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms