RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 TRGC2P03986 189 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 SRP19P09132 144 aaKnown RBP1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 CXCL1P09341 107 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 HLA-DMBP28068 263 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 TAS2R20P59543 309 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 MAXP61244 160 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 RPS28P62857 69 aaKnown RBP1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 CCL20P78556 96 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 RHOGP84095 191 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 NEDD8Q15843 81 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 MIAQ16674 131 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 CCSMST1Q4G0I0 132 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 MORN2Q502X0 79 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 LINC01554Q52M75 96 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 GLYATL3Q5SZD4 288 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 TMEM229BQ8NBD8 167 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 OR4C6Q8NH72 309 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 TERB2Q8NHR7 220 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 CANT1Q8WVQ1 401 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 MALSU1Q96EH3 234 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 Q96M85 177 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 C12orf57Q99622 126 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 SLC25A21Q9BQT8 299 aaPredicted RBP1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 GGACTQ9BVM4 153 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 SMIM3Q9BZL3 60 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 OR2H1Q9GZK4 316 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 OR2J1Q9GZK6 312 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 TMEM133Q9H2Q1 129 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 HIGD1AQ9Y241 93 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 RBM7Q9Y580 266 aaKnown RBP1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 PRG4Q92954 1404 aaPredicted RBP1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 PLXNA4Q9HCM2 1894 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 CCNB3Q8WWL7 1395 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 ARHGEF11O15085 1522 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 USP54Q70EL1 1684 aa1.2□□□□□ -2.22
UBE2E3-212ENST00000602888 ALPK3Q96L96 1907 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 GGT3PA6NGU5 568 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 AIPO00170 330 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 GADD45GO95257 159 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 OR2H2O95918 312 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 MT-ND4LP03901 98 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 PRM2P04554 102 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 BCL2P10415 239 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 DEFA4P12838 97 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 NFYBP25208 207 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 CMPK1P30085 196 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 RNASE4P34096 147 aaKnown RBP1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 PSG9Q00887 426 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 RRN3P1Q2M238 152 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 SCIMPQ6UWF3 145 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 ZNF705AQ6ZN79 300 aaPredicted RBP1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 TEX29Q8N6K0 151 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 NUP35Q8NFH5 326 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 OR4E2Q8NGC2 313 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 OR13C4Q8NGS5 318 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 TEX37Q96LM6 180 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 NIT2Q9NQR4 276 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 ERG28Q9UKR5 140 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 TNFSF18Q9UNG2 199 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 ANKRD26Q9UPS8 1709 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 TIMM9Q9Y5J7 89 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 IBTKQ9P2D0 1353 aaPredicted RBP1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 MED23Q9ULK4 1368 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 MYLKQ15746 1914 aa1.19□□□□□ -2.22
UBE2E3-212ENST00000602888 UHRF1BP1LA0JNW5 1464 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 TCOF1Q13428 1488 aaKnown RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 FREM1Q5H8C1 2179 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 FAM135BQ49AJ0 1406 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 MYOM3Q5VTT5 1437 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 LOC100130705A0A1B0GUX0 176 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 SPAARA0A1B0GVQ0 90 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 TLCD2A6NGC4 264 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 FABP5P3A8MUU1 101 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 SULT1C4O75897 302 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 SCTP09683 121 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 LINC00694P0DN24 101 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 ZNF25P17030 456 aaPredicted RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 CSN1S1P47710 185 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 EIF3IQ13347 325 aaKnown RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 NNATQ16517 81 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 RTL8BQ17RB0 113 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 VMA21Q3ZAQ7 101 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 LYRM7Q5U5X0 104 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 C1orf140Q5VVS0 124 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 RPL22L1Q6P5R6 122 aaKnown RBP1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 TMEM14EPQ6UXP3 125 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 PDZD9Q8IXQ8 264 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 OR8I2Q8N0Y5 310 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 C3orf56Q8N813 242 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 SLC30A7Q8NEW0 376 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 TMEM70Q9BUB7 260 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 RTL8AQ9BWD3 113 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 IMUPQ9GZP8 106 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 CST9LQ9H4G1 147 aa1.18□□□□□ -2.22
UBE2E3-212ENST00000602888 RNF122Q9H9V4 155 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms