RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TMEM74BQ9NUR3 256 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SAA2-SAA4A0A096LPE2 208 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SAA2P0DJI9 122 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SRSF1Q07955 248 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 IGHV2OR16-5A0A0B4J2B6 119 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SAP30O75446 220 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 IFI27P40305 119 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 IFI6P09912 130 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SMIM10L1P0DMW3 83 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 SMIM10Q96HG1 83 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 C1QTNF4Q9BXJ3 329 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1D-8A0A087WSZ0 117 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 Q6AWC8 147 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 C1QTNF5Q9BXJ0 243 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 COLQQ9Y215 455 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 ADAMTS9Q9P2N4 1935 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 CD28P10747 220 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 BVES-AS1Q5T3Y7 98 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 OTORQ9NRC9 128 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 TM2D1Q9BX74 207 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 IGLC3P0DOY3 106 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 IGLV3-21P80748 117 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-216ENST00000602557 GGTLC1Q9BX51 225 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 LOC102723996A0A087X1L8 192 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 A0A0A6YYD4 124 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 HTN3P15516 51 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 FDCSPQ8NFU4 85 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 LINC01587Q99440 93 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 KLHDC3Q9BQ90 382 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 PRR32B1ATL7 298 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 PPP1R27Q86WC6 154 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 OSR1Q8TAX0 266 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-216ENST00000602557 HIVEP3Q5T1R4 2406 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 A0A1W2PPM0 123 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 CLEC19AQ6UXS0 136 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 TRAV1-1A0A0B4J248 108 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 FAM89BQ8N5H3 189 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF319Q9P2F9 582 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 CFAP161Q6P656 301 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 ASCL2Q99929 193 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 CEP192Q8TEP8 1941 aa7.22□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1D-43A0A0B4J1Z2 117 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE5Q13069 117 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE6Q13070 117 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 C3orf36Q3SXR2 165 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 SIGLEC12Q96PQ1 595 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 TANC1Q9C0D5 1861 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 AGRNO00468 2067 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 AGMATQ9BSE5 352 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 TM4SF5O14894 197 aa7.21□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF688P0C7X2 276 aa7.21□□□□□ -1.26
CSMD1-216ENST00000602557 DSCAMO60469 2012 aa7.21□□□□□ -1.26
CSMD1-216ENST00000602557 CD24P25063 80 aa7.21□□□□□ -1.26
CSMD1-216ENST00000602557 SLAQ13239 276 aa7.21□□□□□ -1.26
CSMD1-216ENST00000602557 EFNB3Q15768 340 aa7.21□□□□□ -1.26
CSMD1-216ENST00000602557 KIAA1549LQ6ZVL6 1849 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 WNT2P09544 360 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 OR9G9P0C7N8 305 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 DPM3Q9P2X0 92 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TMEM42Q69YG0 159 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 J3QW42 95 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 CD7P09564 240 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 AMTNQ6UX39 209 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 H3BMG7 143 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TOMM40O96008 361 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 SP9P0CG40 484 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TRAV26-1A0A087WT03 109 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 MALP21145 153 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 GFRA3O60609 400 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 APOBEC3AP31941 199 aaPredicted RBP7.2□□□□□ -1.26
CSMD1-216ENST00000602557 TRGV2A0A075B6R0 118 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 SUPT4H1P63272 117 aaKnown RBP7.2□□□□□ -1.26
CSMD1-216ENST00000602557 FAM27E3Q08E93 113 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 ZC2HC1BQ5TFG8 222 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 LTBP4Q8N2S1 1624 aa7.2□□□□□ -1.26
CSMD1-216ENST00000602557 NPIPB5A8MRT5 1133 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 F8W1H4 67 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 TFF1P04155 84 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 RPRMLQ8N4K4 120 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 SLC25A20O43772 301 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 PAX1P15863 534 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 FAM168AQ92567 244 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 F2Z2F3 143 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 CACNG8Q8WXS5 425 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 EFEMP2O95967 443 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 IGFBP3P17936 291 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-216ENST00000602557 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 PLXNA4Q9HCM2 1894 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms