RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
SYMPK-215ENST00000600237 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
SYMPK-215ENST00000600237 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
SYMPK-215ENST00000600237 CD28P10747 220 aa11.84□□□□□ -0.51
SYMPK-215ENST00000600237 FANCMQ8IYD8 2048 aa11.83□□□□□ -0.51
SYMPK-215ENST00000600237 ZNF124Q15973 351 aa11.83□□□□□ -0.52
SYMPK-215ENST00000600237 C1orf147Q96MC9 270 aaPredicted RBP11.83□□□□□ -0.52
SYMPK-215ENST00000600237 TDGF1P13385 188 aa11.83□□□□□ -0.52
SYMPK-215ENST00000600237 BUB1B-PAK6H3BSN5 160 aa11.83□□□□□ -0.52
SYMPK-215ENST00000600237 TOMM40O96008 361 aa11.83□□□□□ -0.52
SYMPK-215ENST00000600237 RPL15P61313 204 aaKnown RBP11.83□□□□□ -0.52
SYMPK-215ENST00000600237 PSG3Q16557 428 aa11.83□□□□□ -0.52
SYMPK-215ENST00000600237 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 LY6G6EA0A0G2JKS1 128 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 U3KQA8 63 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 LMO1P25800 156 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 SAMD5Q5TGI4 173 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 CRIM1Q9NZV1 1036 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 LINC00477Q96M19 166 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 NCR2O95944 276 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 ZNF407Q9C0G0 2248 aa11.82□□□□□ -0.52
SYMPK-215ENST00000600237 DLEU1O43261 78 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 PAX2Q02962 417 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 TRAV2A0A0B4J234 112 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 A8MWV9 139 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 PDE6HQ13956 83 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 CD300EQ496F6 205 aaPredicted RBP11.81□□□□□ -0.52
SYMPK-215ENST00000600237 DOCK10Q96BY6 2186 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 SYS1-DBNDD2H3BUS1 97 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 NBL1P41271 181 aa11.81□□□□□ -0.52
SYMPK-215ENST00000600237 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 TMEM238C9JI98 176 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 KIR3DL3Q8N743 410 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 GFRA4Q9GZZ7 299 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 SH2D1AO60880 128 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.521e-6■■■■□ 22
SYMPK-215ENST00000600237 C9JQL5 133 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 Q0VG73 95 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 MORN3Q6PF18 240 aaPredicted RBP11.8□□□□□ -0.52
SYMPK-215ENST00000600237 LINC00527Q9UJ94 153 aa11.8□□□□□ -0.52
SYMPK-215ENST00000600237 CD33P20138 364 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 GUSBP1Q15486 140 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 LCN12Q6JVE5 192 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 IGKV1-16P04430 117 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 LINC00205P59089 165 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 ZNF474Q6S9Z5 364 aaPredicted RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.79□□□□□ -0.52
SYMPK-215ENST00000600237 KLRD1Q13241 179 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 ZNF329Q86UD4 541 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SYMPK-215ENST00000600237 Q86TA4 180 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 PLEKHB2Q96CS7 222 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 RSPO3Q9BXY4 272 aaPredicted RBP11.78□□□□□ -0.52
SYMPK-215ENST00000600237 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
SYMPK-215ENST00000600237 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 PTPRDP23468 1912 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 A6NNC1 897 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 VCYO14598 125 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 TMEM155Q4W5P6 130 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 TMEM14BQ9NUH8 114 aa11.78□□□□□ -0.52
SYMPK-215ENST00000600237 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.52
SYMPK-215ENST00000600237 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.52
SYMPK-215ENST00000600237 B4DSR2 109 aa11.77□□□□□ -0.52
SYMPK-215ENST00000600237 SLC25A20O43772 301 aa11.77□□□□□ -0.52
SYMPK-215ENST00000600237 PRTN3P24158 256 aa11.77□□□□□ -0.52
SYMPK-215ENST00000600237 Q8TAT8 98 aa11.77□□□□□ -0.53
SYMPK-215ENST00000600237 ZNF492Q9P255 531 aa11.77□□□□□ -0.53
SYMPK-215ENST00000600237 HEATR5AQ86XA9 2040 aa11.77□□□□□ -0.53
SYMPK-215ENST00000600237 CT83Q5H943 113 aa11.77□□□□□ -0.53
SYMPK-215ENST00000600237 PCNX1Q96RV3 2341 aa11.77□□□□□ -0.53
SYMPK-215ENST00000600237 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 IGHV4-39P01824 125 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 MALP21145 153 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 TMEM95Q3KNT9 176 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 SHANK1Q9Y566 2161 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 A0A1W2PPI3 338 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 PAX9P55771 341 aa11.76□□□□□ -0.53
SYMPK-215ENST00000600237 TMEM219Q86XT9 240 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms