RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 HBE1P02100 147 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 VAMP1P23763 118 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
PNKP-210ENST00000597965 H2BFSP57053 126 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 OR4B1Q8NGF8 309 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 DTD1Q8TEA8 209 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 HYLS1Q96M11 299 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
PNKP-210ENST00000597965 FAT2Q9NYQ8 4349 aa12.15□□□□□ -0.47
PNKP-210ENST00000597965 ISLRO14498 428 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 S100A7P31151 101 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 MEOX2P50222 304 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 PSG9Q00887 426 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 Q5BKY6 102 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 OR11H4Q8NGC9 324 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 SLC35E1Q96K37 410 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 HSPB7Q9UBY9 170 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 PKHD1P08F94 4074 aa12.14□□□□□ -0.47
PNKP-210ENST00000597965 MUC4Q99102 2169 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 NXPH3O95157 252 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
PNKP-210ENST00000597965 FAM3BP58499 235 aaPredicted RBP12.13□□□□□ -0.47
PNKP-210ENST00000597965 SRPXP78539 464 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 GDF5OSQ5U4N7 250 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 OR2T35Q8NGX2 323 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 DNAH2Q9P225 4427 aa12.13□□□□□ -0.47
PNKP-210ENST00000597965 PAX9P55771 341 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 RAB11AP62491 216 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 Q6ZR54 194 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 OR8I2Q8N0Y5 310 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 SCRT1Q9BWW7 348 aa12.12□□□□□ -0.47
PNKP-210ENST00000597965 IGLV2-18A0A075B6J9 118 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 LOC102723971A0A1B0GUV8 181 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 FXYD7P58549 80 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 LYZP61626 148 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 GAMTQ14353 236 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 TMED3Q9Y3Q3 217 aa12.11□□□□□ -0.47
PNKP-210ENST00000597965 CCSO14618 274 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 HTN3P15516 51 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 GALR1P47211 349 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 DAD1P61803 113 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 GGNBP1Q5YKI7 109 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 GSG1LQ6UXU4 331 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 C9orf62Q8N4C0 152 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 RBKSQ9H477 322 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 PRR13Q9NZ81 148 aa12.1□□□□□ -0.47
PNKP-210ENST00000597965 YTHDF2Q9Y5A9 579 aaKnown RBP12.1□□□□□ -0.47
PNKP-210ENST00000597965 SOCS3O14543 225 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 B2MP61769 119 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
PNKP-210ENST00000597965 IFITM2Q01629 132 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 ZNF90Q03938 601 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 ZBTB8BQ8NAP8 495 aaPredicted RBP12.09□□□□□ -0.47
PNKP-210ENST00000597965 OR1S1Q8NH92 325 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 C16orf92Q96LL3 132 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 TRGV9Q99603 122 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 SLC35B3Q9H1N7 401 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 SLC45A2Q9UMX9 530 aa12.09□□□□□ -0.47
PNKP-210ENST00000597965 A0A0J9YX75 114 aa12.08□□□□□ -0.48
PNKP-210ENST00000597965 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
PNKP-210ENST00000597965 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
PNKP-210ENST00000597965 GPR82Q96P67 336 aa12.08□□□□□ -0.48
PNKP-210ENST00000597965 DOK5Q9P104 306 aa12.08□□□□□ -0.48
PNKP-210ENST00000597965 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 ADAP1O75689 374 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 TMEM88Q6PEY1 159 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 LYZL2Q7Z4W2 148 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
PNKP-210ENST00000597965 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
PNKP-210ENST00000597965 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 C5orf51A6NDU8 294 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 FAM25EA8MYX2 175 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 MED6O75586 246 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 DUSP14O95147 198 aaKnown RBP12.06□□□□□ -0.48
PNKP-210ENST00000597965 DEFB1P60022 68 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 IL15RAQ13261 267 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 C1orf158Q8N1D5 194 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 C2orf50Q96LR7 162 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 NMES1Q9C002 83 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 HSPB11Q9Y547 144 aa12.06□□□□□ -0.48
PNKP-210ENST00000597965 HOXB5P09067 269 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms