RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 RHOBP62745 196 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 OR2F1Q13607 317 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 SELENOHQ8IZQ5 122 aaKnown RBP6.94□□□□□ -1.3
TRIM28-210ENST00000597618 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 OR4D5Q8NGN0 318 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 TERB2Q8NHR7 220 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 LHFPL5Q8TAF8 219 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 DTD1Q8TEA8 209 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 GLYATL2Q8WU03 294 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 TRGV9Q99603 122 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 TRAV8-2A0A0B4J237 113 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 TEX13DA0A0J9YY54 714 aaPredicted RBP6.93□□□□□ -1.3
TRIM28-210ENST00000597618 ZNF98A6NK75 572 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 H7BYZ3 331 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 RLN2P04090 185 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 CD3DP04234 171 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 DNAH10OSP0CZ25 163 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 SULT1A3P0DMM9 295 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 SULT1A4P0DMN0 295 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 TGFBR1P36897 503 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 HIST1H1AQ02539 215 aaPredicted RBP6.93□□□□□ -1.3
TRIM28-210ENST00000597618 MEF2DQ14814 521 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 SCGB2B2Q4G0G5 96 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 TMEM268Q5VZI3 342 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 GGNBP1Q5YKI7 109 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 NAA60Q9H7X0 242 aa6.93□□□□□ -1.3
TRIM28-210ENST00000597618 C14orf166Q9Y224 244 aaKnown RBP6.93□□□□□ -1.3
TRIM28-210ENST00000597618 GAGE12BA1L429 117 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
TRIM28-210ENST00000597618 GAGE7O76087 117 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 GAGE12FP0CL80 117 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 GAGE12GP0CL81 117 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 GAGE12IP0CL82 117 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 CDKN1BP46527 198 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 NEDD8Q15843 81 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 CCDC28AQ8IWP9 274 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 OR8A1Q8NGG7 326 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 MARCH1Q8TCQ1 289 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 HSPB7Q9UBY9 170 aa6.92□□□□□ -1.3
TRIM28-210ENST00000597618 A0A096LPF7 62 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 SNURFLB1AK76 121 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 NXPH4O95158 308 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 HAMPP81172 84 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 FGL1Q08830 312 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 GPR107Q5VW38 600 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 THAP8Q8NA92 274 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 OR4D10Q8NGI6 311 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 TMEM147Q9BVK8 224 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 TMPRSS5Q9H3S3 457 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 RBKSQ9H477 322 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 TMEM56-RWDD3S4R434 201 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
TRIM28-210ENST00000597618 IGKV1OR2-108A0A075B7D4 117 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 ANKRD65E5RJM6 399 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 ORM2P19652 201 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 CCR6P51684 374 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 SMCO1Q147U7 214 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 SURF2Q15527 256 aaPredicted RBP6.9□□□□□ -1.3
TRIM28-210ENST00000597618 TMED4Q7Z7H5 227 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 RTBDNQ9BSG5 229 aaPredicted RBP6.9□□□□□ -1.3
TRIM28-210ENST00000597618 MTFP1Q9UDX5 166 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
TRIM28-210ENST00000597618 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
TRIM28-210ENST00000597618 CRYM-AS1A6NIL9 109 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 RAB3DO95716 219 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
TRIM28-210ENST00000597618 RPL7P18124 248 aaKnown RBP6.89□□□□□ -1.31
TRIM28-210ENST00000597618 CXCL3P19876 107 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 TAS2R19P59542 299 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 RAB11AP62491 216 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 OR52I2Q8NH67 350 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 Q9H521 79 aa6.89□□□□□ -1.31
TRIM28-210ENST00000597618 TRGV2A0A075B6R0 118 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 H3BRN7 92 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 K7EP13 123 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 HPGDSO60760 199 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 AKR1C4P17516 323 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
TRIM28-210ENST00000597618 DAZ2Q13117 558 aaKnown RBP6.88□□□□□ -1.31
TRIM28-210ENST00000597618 PSG3Q16557 428 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 STEAP1BQ6NZ63 245 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 Q6ZTI0 123 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 OR1S1Q8NH92 325 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 LRRC20Q8TCA0 184 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 RPUSD4Q96CM3 377 aaKnown RBP6.88□□□□□ -1.31
TRIM28-210ENST00000597618 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
TRIM28-210ENST00000597618 A0A087X0K7 114 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms