RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 TRAV8-2A0A0B4J237 113 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 M0R2Z0 102 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
LINC02560-201ENST00000596379 SYNGR2O43760 224 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
LINC02560-201ENST00000596379 VAMP1P23763 118 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 RNF182Q8N6D2 247 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 KRTAP4-5Q9BYR2 181 aa11.22□□□□□ -0.61
LINC02560-201ENST00000596379 LYRM9A8MSI8 78 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 INSP01308 110 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 FAUP35544 74 aaKnown RBP11.21□□□□□ -0.61
LINC02560-201ENST00000596379 TMBIM6P55061 237 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.61
LINC02560-201ENST00000596379 FGL1Q08830 312 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 GPR82Q96P67 336 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 ATG101Q9BSB4 218 aa11.21□□□□□ -0.61
LINC02560-201ENST00000596379 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
LINC02560-201ENST00000596379 HOXB5P09067 269 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 AZU1P20160 251 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 S100A7P31151 101 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 AKR1C1Q04828 323 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 FCN2Q15485 313 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 BAP18Q8IXM2 172 aa11.2□□□□□ -0.62
LINC02560-201ENST00000596379 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 F5H768 121 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 SFT2D2O95562 160 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 B2MP61769 119 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 TOMM5Q8N4H5 51 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 BCL7BQ9BQE9 202 aa11.19□□□□□ -0.62
LINC02560-201ENST00000596379 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
LINC02560-201ENST00000596379 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 H3BP45 60 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 H3BRN7 92 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 TSPOP30536 169 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 TNP2Q05952 138 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 PPP1R1AQ13522 171 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 PYDC2Q56P42 97 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 ACOT7LQ6ZUV0 252 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 TMEM144Q7Z5S9 345 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 MCFD2Q8NI22 146 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 TRIM63Q969Q1 353 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 LINC01587Q99440 93 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 SLC25A21Q9BQT8 299 aaPredicted RBP11.18□□□□□ -0.62
LINC02560-201ENST00000596379 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
LINC02560-201ENST00000596379 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
LINC02560-201ENST00000596379 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 NUDT3O95989 172 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 IL5P05113 134 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 AP3S2P59780 193 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 RAP2BP61225 183 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
LINC02560-201ENST00000596379 H3BMQ9 156 aa11.16□□□□□ -0.62
LINC02560-201ENST00000596379 HYPMO75409 117 aa11.16□□□□□ -0.62
LINC02560-201ENST00000596379 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
LINC02560-201ENST00000596379 HTN1P15515 57 aa11.16□□□□□ -0.62
LINC02560-201ENST00000596379 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
LINC02560-201ENST00000596379 RHOBP62745 196 aa11.16□□□□□ -0.62
LINC02560-201ENST00000596379 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
LINC02560-201ENST00000596379 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
LINC02560-201ENST00000596379 HSPG2P98160 4391 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 CBY3A6NI87 242 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 C16orf90A8MZG2 172 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 ATP5G1P05496 136 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 OR5G3P0C626 314 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 CXCL3P19876 107 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 ATP5G3P48201 142 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 ID3Q02535 119 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 C6orf223Q8N319 242 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
LINC02560-201ENST00000596379 PMS2P5A8MQ11 134 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
LINC02560-201ENST00000596379 ADAP1O75689 374 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 LINC00869P0C866 280 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 CCL18P55774 89 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 TAS2R60P59551 318 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 PLP1P60201 277 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC02560-201ENST00000596379 PSG3Q16557 428 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 TMEM256Q8N2U0 113 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 LINC00588Q9Y4M8 146 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 V9GYH0 126 aa11.14□□□□□ -0.63
LINC02560-201ENST00000596379 A0A087X0K7 114 aa11.13□□□□□ -0.63
LINC02560-201ENST00000596379 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
LINC02560-201ENST00000596379 RNF141Q8WVD5 230 aa11.13□□□□□ -0.63
LINC02560-201ENST00000596379 CCNKO75909 580 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms