RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 SLC25A2Q9BXI2 301 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 CACNA1AO00555 2505 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 IGLL5B9A064 214 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 CEND1Q8N111 149 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 CIARTQ8N365 385 aaPredicted RBP10.05□□□□□ -0.8
LIG1-207ENST00000594759 ZNF71Q9NQZ8 489 aaPredicted RBP10.05□□□□□ -0.8
LIG1-207ENST00000594759 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
LIG1-207ENST00000594759 CHCHD2Q9Y6H1 151 aaPredicted RBP10.05□□□□□ -0.8
LIG1-207ENST00000594759 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 FAM90A9PA6NNJ1 464 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 TFF1P04155 84 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 SP5Q6BEB4 398 aaPredicted RBP10.04□□□□□ -0.8
LIG1-207ENST00000594759 HCP5Q6MZN7 132 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
LIG1-207ENST00000594759 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 FAM53AQ6NSI3 398 aaPredicted RBP10.04□□□□□ -0.8
LIG1-207ENST00000594759 PMS2P5A8MQ11 134 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 CD69Q07108 199 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 KLRD1Q13241 179 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 VKORC1Q9BQB6 163 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 DYSFO75923 2080 aa10.04□□□□□ -0.8
LIG1-207ENST00000594759 MGST3O14880 152 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 ARMS2P0C7Q2 107 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 MDP1Q86V88 176 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 SCNM1Q9BWG6 230 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
LIG1-207ENST00000594759 TRAV8-4A0A0B4J246 113 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 TCRBV4S1A1TA0A5B7 111 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 EVI2AP22794 236 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 MOB3BQ86TA1 216 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 C17orf82Q86X59 251 aaPredicted RBP10.03□□□□□ -0.8
LIG1-207ENST00000594759 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
LIG1-207ENST00000594759 ZNF714Q96N38 554 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 COX6CP09669 75 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 FOXI1Q12951 378 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 CRIP3Q6Q6R5 217 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 ZNF329Q86UD4 541 aa10.03□□□□□ -0.8
LIG1-207ENST00000594759 C21orf140B9A014 251 aa10.02□□□□□ -0.8
LIG1-207ENST00000594759 NUP210LQ5VU65 1888 aa10.02□□□□□ -0.8
LIG1-207ENST00000594759 K7EMI3 77 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 NCR2O95944 276 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 SRSF6Q13247 344 aaKnown RBP10.02□□□□□ -0.81
LIG1-207ENST00000594759 MLANAQ16655 118 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 Q6ZPA2 131 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 PSG8Q9UQ74 426 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 MT-ATP8P03928 68 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 S100A4P26447 101 aaKnown RBP10.02□□□□□ -0.81
LIG1-207ENST00000594759 TTTY12Q9BZ98 90 aa10.02□□□□□ -0.81
LIG1-207ENST00000594759 C2orf16Q68DN1 1984 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 PSPNO60542 156 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 ZNF688P0C7X2 276 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 CFHR2P36980 270 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 GFRA4Q9GZZ7 299 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 IGHV3OR15-7A0A075B7D8 119 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 M0R1B8 84 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 MRPL14Q6P1L8 145 aaKnown RBP10.01□□□□□ -0.81
LIG1-207ENST00000594759 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 PROCRQ9UNN8 238 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TECTAO75443 2155 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 KIAA1549LQ6ZVL6 1849 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TRGV8A0A0C4DH27 118 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 CRXO43186 299 aaPredicted RBP10.01□□□□□ -0.81
LIG1-207ENST00000594759 Q6P435 159 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 PPP1R27Q86WC6 154 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 AMN1Q8IY45 258 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 DYNLRB1Q9NP97 96 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
LIG1-207ENST00000594759 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TMEM8BA6NDV4 472 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TCRAP04437 139 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 NRN1LQ496H8 165 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 CT83Q5H943 113 aa10.01□□□□□ -0.81
LIG1-207ENST00000594759 TNCP24821 2201 aa10□□□□□ -0.81
LIG1-207ENST00000594759 LINC01549A6NIU2 74 aa10□□□□□ -0.81
LIG1-207ENST00000594759 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
LIG1-207ENST00000594759 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
LIG1-207ENST00000594759 PEAR1Q5VY43 1037 aaPredicted RBP10□□□□□ -0.81
LIG1-207ENST00000594759 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
LIG1-207ENST00000594759 IGLV3-32A0A0A0MS00 114 aa10□□□□□ -0.81
LIG1-207ENST00000594759 ZNF815PA8K554 130 aa10□□□□□ -0.81
LIG1-207ENST00000594759 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
LIG1-207ENST00000594759 FOXL2NBQ6ZUU3 175 aa10□□□□□ -0.81
LIG1-207ENST00000594759 ADAMTS9Q9P2N4 1935 aa10□□□□□ -0.81
LIG1-207ENST00000594759 FREM1Q5H8C1 2179 aa10□□□□□ -0.81
LIG1-207ENST00000594759 TRBV25-1A0A075B6N4 114 aa10□□□□□ -0.81
LIG1-207ENST00000594759 SPRY3O43610 288 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms