RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 ZFAND3Q9H8U3 227 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 H3BRN7 92 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
VRK3-207ENST00000594092 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 OR5B12Q96R08 314 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 RPS10P5Q9NQ39 176 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
VRK3-207ENST00000594092 BMPR1BO00238 502 aa11.69□□□□□ -0.54
VRK3-207ENST00000594092 S100A7P31151 101 aa11.69□□□□□ -0.54
VRK3-207ENST00000594092 NAT8Q9UHE5 227 aa11.69□□□□□ -0.54
VRK3-207ENST00000594092 SCO2A0A1W2PP80 73 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 C7orf77A4D0Y5 90 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 TCF21O43680 179 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 GP9P14770 177 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 NPPCP23582 126 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
VRK3-207ENST00000594092 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 WIPF2Q8TF74 440 aaPredicted RBP11.68□□□□□ -0.54
VRK3-207ENST00000594092 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 TMEM14CQ9P0S9 112 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
VRK3-207ENST00000594092 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
VRK3-207ENST00000594092 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
VRK3-207ENST00000594092 NDUFB4O95168 129 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 TCTEX1D4Q5JR98 221 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 BPIFA4PQ86YQ2 179 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 UBE2E2Q96LR5 201 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 RNF24Q9Y225 148 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 CLPSL1A2RUU4 121 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 ZNF98A6NK75 572 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
VRK3-207ENST00000594092 NDUFA7O95182 113 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 SUMO1P63165 101 aaKnown RBP11.67□□□□□ -0.54
VRK3-207ENST00000594092 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
VRK3-207ENST00000594092 B4DEV8 164 aa11.66□□□□□ -0.54
VRK3-207ENST00000594092 NDUFA4O00483 81 aa11.66□□□□□ -0.54
VRK3-207ENST00000594092 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
VRK3-207ENST00000594092 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
VRK3-207ENST00000594092 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
VRK3-207ENST00000594092 HIST1H1EP10412 219 aaKnown RBP11.65□□□□□ -0.54
VRK3-207ENST00000594092 AKR1C3P42330 323 aa11.65□□□□□ -0.54
VRK3-207ENST00000594092 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
VRK3-207ENST00000594092 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
VRK3-207ENST00000594092 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
VRK3-207ENST00000594092 SMCO4Q9NRQ5 59 aa11.65□□□□□ -0.54
VRK3-207ENST00000594092 UNQ9165/PRO28630Q6UXU0 137 aa11.65□□□□□ -0.55
VRK3-207ENST00000594092 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.55
VRK3-207ENST00000594092 DERL1Q9BUN8 251 aa11.65□□□□□ -0.55
VRK3-207ENST00000594092 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
VRK3-207ENST00000594092 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
VRK3-207ENST00000594092 CRYBB3P26998 211 aa11.64□□□□□ -0.55
VRK3-207ENST00000594092 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
VRK3-207ENST00000594092 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
VRK3-207ENST00000594092 ADIRFQ15847 76 aa11.64□□□□□ -0.55
VRK3-207ENST00000594092 C18orf65Q6ZTR6 163 aa11.64□□□□□ -0.55
VRK3-207ENST00000594092 METTL26Q96S19 204 aa11.64□□□□□ -0.55
VRK3-207ENST00000594092 A0A087WWC5 75 aa11.63□□□□□ -0.55
VRK3-207ENST00000594092 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
VRK3-207ENST00000594092 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
VRK3-207ENST00000594092 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
VRK3-207ENST00000594092 ELOVL1Q9BW60 279 aa11.63□□□□□ -0.55
VRK3-207ENST00000594092 SETD2Q9BYW2 2564 aaPredicted RBP11.63□□□□□ -0.55
VRK3-207ENST00000594092 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
VRK3-207ENST00000594092 U3KQE9 123 aa11.63□□□□□ -0.55
VRK3-207ENST00000594092 IGHV4OR15-8A0A075B7B6 117 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 A0A087WW49 117 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 BUB3O43684 328 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
VRK3-207ENST00000594092 IGLC2P0DOY2 106 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
VRK3-207ENST00000594092 MYCNOSP40205 109 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
VRK3-207ENST00000594092 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 Q9H3A6 140 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 PRELID1Q9Y255 219 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 RNF114Q9Y508 228 aa11.62□□□□□ -0.55
VRK3-207ENST00000594092 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 PGPA6NDG6 321 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 HELTA6NFD8 242 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 H3BTX0 84 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 CD28P10747 220 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 RPEL1Q2QD12 228 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 FAM106AQ4KMX7 169 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 OR8I2Q8N0Y5 310 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 HIST1H2BAQ96A08 127 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 OTORQ9NRC9 128 aa11.61□□□□□ -0.55
VRK3-207ENST00000594092 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms