RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CT83Q5H943 113 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
LIG1-206ENST00000594067 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
LIG1-206ENST00000594067 ZNF292O60281 2723 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
LIG1-206ENST00000594067 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 EXOC3-AS1Q8N2X6 119 aa13.11□□□□□ -0.31
LIG1-206ENST00000594067 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
LIG1-206ENST00000594067 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
LIG1-206ENST00000594067 NUDT3O95989 172 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 IGLC1P0CG04 106 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 PLP1P60201 277 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 ERASQ7Z444 233 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 TAX1BP3O14907 124 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 RBP4P02753 201 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 VAMP3Q15836 100 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
LIG1-206ENST00000594067 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
LIG1-206ENST00000594067 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
LIG1-206ENST00000594067 RHOGP84095 191 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 PRNTQ86SH4 94 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 NGBQ9NPG2 151 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 MALRD1Q5VYJ5 2156 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 APOBEC3AP31941 199 aaPredicted RBP13.09□□□□□ -0.31
LIG1-206ENST00000594067 PLGLAQ15195 96 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 SLC25A34Q6PIV7 304 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
LIG1-206ENST00000594067 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 Q86TA4 180 aa13.09□□□□□ -0.31
LIG1-206ENST00000594067 APC2O95996 2303 aa13.08□□□□□ -0.31
LIG1-206ENST00000594067 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.31
LIG1-206ENST00000594067 RPEQ96AT9 228 aa13.08□□□□□ -0.31
LIG1-206ENST00000594067 ASCL2Q99929 193 aa13.08□□□□□ -0.31
LIG1-206ENST00000594067 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.31
LIG1-206ENST00000594067 OTORQ9NRC9 128 aa13.08□□□□□ -0.31
LIG1-206ENST00000594067 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
LIG1-206ENST00000594067 COL8A1P27658 744 aa13.08□□□□□ -0.32
LIG1-206ENST00000594067 ZNF138P52744 262 aa13.08□□□□□ -0.32
LIG1-206ENST00000594067 RASL11BQ9BPW5 248 aa13.08□□□□□ -0.32
LIG1-206ENST00000594067 TMEM191AQ9H0A3 160 aa13.08□□□□□ -0.32
LIG1-206ENST00000594067 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
LIG1-206ENST00000594067 I3L2K1 104 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 MCRIP2Q9BUT9 160 aaKnown RBP13.07□□□□□ -0.32
LIG1-206ENST00000594067 PPIAL4CA0A0B4J2A2 164 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.07□□□□□ -0.32
LIG1-206ENST00000594067 PPIAL4GP0DN37 164 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 IGFBPL1Q8WX77 278 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 SCRT2Q9NQ03 307 aa13.07□□□□□ -0.32
LIG1-206ENST00000594067 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 LIPFP07098 398 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 OR5AL1P0C617 328 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 PAX2Q02962 417 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 MUC21Q5SSG8 566 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 C17orf77Q96MU5 243 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 B9A039 149 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 CHEK1O14757 476 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 CNIH1O95406 144 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
LIG1-206ENST00000594067 CD3EP07766 207 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 OVOL3O00110 214 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 IGKV1-17P01599 117 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 PET117Q6UWS5 81 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
LIG1-206ENST00000594067 RBPJQ06330 500 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 TCF15Q12870 199 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 LINC01560Q8TB33 94 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 POLEQ07864 2286 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 HSBP1L1C9JCN9 74 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 LDLRAD2Q5SZI1 272 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 C12orf54Q6X4T0 127 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 ONECUT1Q9UBC0 465 aa13.05□□□□□ -0.32
LIG1-206ENST00000594067 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
LIG1-206ENST00000594067 HAX1O00165 279 aa13.04□□□□□ -0.32
LIG1-206ENST00000594067 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
LIG1-206ENST00000594067 TMUB1Q9BVT8 246 aa13.04□□□□□ -0.32
LIG1-206ENST00000594067 S4R3C0 116 aa13.04□□□□□ -0.32
LIG1-206ENST00000594067 TPRP12270 2363 aaKnown RBP13.04□□□□□ -0.32
LIG1-206ENST00000594067 TIMM23O14925 209 aa13.04□□□□□ -0.32
LIG1-206ENST00000594067 ZNF785A8K8V0 405 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 K7EIM0 57 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 TACC2O95359 2948 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
LIG1-206ENST00000594067 H0Y8G0 127 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms