RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RSG1Q9BU20 258 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 TEX12Q9BXU0 123 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 NAA50Q9GZZ1 169 aaKnown RBP1.72□□□□□ -2.13
VRK3-204ENST00000593912 GFRA4Q9GZZ7 299 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 GTSF1LQ9H1H1 148 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 SLC25A32Q9H2D1 315 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 IMPAD1Q9NX62 359 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 EHFQ9NZC4 300 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 OAZ3Q9UMX2 235 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 A0A075B6Q4 140 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 A0A087X002 238 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 PNMA8CA0A1B0GUJ8 204 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 J3QRE1 110 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 SLC17A2O00624 439 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 SNAPC5O75971 98 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 KRASP01116 189 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 IFNA7P01567 189 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 MT2AP02795 61 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 PFN1P07737 140 aaKnown RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR10J4P0C629 311 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 CT45A10P0DMU9 189 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 RNASE2P10153 161 aaKnown RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 PSG1P11464 419 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 RFX2P48378 723 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR10A3P58181 314 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 YPEL3P61236 119 aaPredicted RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 POLR2GP62487 172 aaKnown RBP eCLIP1.71□□□□□ -2.14
VRK3-204ENST00000593912 BTN1A1Q13410 526 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 PLAC9Q5JTB6 97 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 TEPPQ6URK8 271 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR8I2Q8N0Y5 310 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 SLC35G3Q8N808 338 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 ZBTB34Q8NCN2 500 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 ZNF680Q8NEM1 530 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR10P1Q8NGE3 313 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR10G4Q8NGN3 311 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR1S2Q8NGQ3 325 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 SAT2Q96F10 170 aaPredicted RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 ARPC5LQ9BPX5 153 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 PYGO2Q9BRQ0 406 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 AIFM2Q9BRQ8 373 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 LPAR5Q9H1C0 372 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 RPP21Q9H633 154 aaKnown RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 SLC25A22Q9H936 323 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 FGF20Q9NP95 211 aaPredicted RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 MRPS18AQ9NVS2 196 aaKnown RBP1.71□□□□□ -2.14
VRK3-204ENST00000593912 OR2W1Q9Y3N9 320 aa1.71□□□□□ -2.14
VRK3-204ENST00000593912 IGLV8-61A0A075B6I0 122 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 TRAV30A0A087WSZ9 112 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 A0A0G2JND7 137 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 RBFOX2O43251 390 aaKnown RBP eCLIP1.7□□□□□ -2.14
VRK3-204ENST00000593912 NDUFS6O75380 124 aaKnown RBP1.7□□□□□ -2.14
VRK3-204ENST00000593912 SCGB2A1O75556 95 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 TOMM40O96008 361 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 MT1FP04733 61 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 CDK1P06493 297 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 HOXB5P09067 269 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 RD3LP0DJH9 198 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 HLA-DMAP28067 261 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 HSPA13P48723 471 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 MEOX2P50222 304 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 ERVK-16P61578 105 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 LYZP61626 148 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 QRFPP83859 136 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 ERHP84090 104 aaKnown RBP1.7□□□□□ -2.14
VRK3-204ENST00000593912 MAPRE2Q15555 327 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 SSX1Q16384 188 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 WHAMMP3Q1A5X7 153 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 IZUMO4Q1ZYL8 232 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 HSP90B2PQ58FF3 399 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 C12orf73Q69YU5 71 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 PRSS54Q6PEW0 395 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 CLPSL2Q6UWE3 100 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 CYP2R1Q6VVX0 501 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 EIF4E3Q8N5X7 224 aaKnown RBP1.7□□□□□ -2.14
VRK3-204ENST00000593912 SLC25A29Q8N8R3 303 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 ZNF431Q8TF32 576 aaPredicted RBP1.7□□□□□ -2.14
VRK3-204ENST00000593912 SECTM1Q8WVN6 248 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 TMEM222Q9H0R3 208 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 C20orf85Q9H1P6 137 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 OR51M1Q9H341 326 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 PLEKHA2Q9HB19 425 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 COMMD9Q9P000 198 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 PRNDQ9UKY0 176 aa1.7□□□□□ -2.14
VRK3-204ENST00000593912 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 IGHV3-73A0A0B4J1V6 119 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 TRAV4A0A0B4J268 109 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 PRAC2D3DTV9 90 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 SLC22A5O76082 557 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 DIRAS3O95661 229 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 FCGR2CP31995 323 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 NUP62P37198 522 aaPredicted RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 SNCAP37840 140 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 LPAR6P43657 344 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 GALR1P47211 349 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 GYS2P54840 703 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 ZNF90Q03938 601 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 FLOT2Q14254 428 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms