RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 COL7A1Q02388 2944 aa7.4□□□□□ -1.23
TPM4-216ENST00000592822 TGP01266 2768 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
TPM4-216ENST00000592822 FRMD6-AS1P0C7T7 363 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 FAM110AQ9BQ89 295 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 MAP6D1Q9H9H5 199 aa7.39□□□□□ -1.23
TPM4-216ENST00000592822 TRAV5A0A0B4J249 113 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 RBMY1BA6NDE4 496 aaKnown RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 RBMY1EA6NEQ0 496 aaKnown RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 HMSDA8MTL9 139 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 C17orf112F2Z3M2 114 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 SOCS3O14543 225 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 MRPS12O15235 138 aaKnown RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 RBMY1DP0C7P1 496 aaKnown RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 GALR1P47211 349 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 CMC4P56277 68 aaPredicted RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 ZNF266Q14584 549 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 ZNF124Q15973 351 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 LINC00322Q6ZN03 302 aaPredicted RBP7.38□□□□□ -1.23
TPM4-216ENST00000592822 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 APRG1Q8IVJ8 170 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 TCTE3Q8IZS6 198 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 GPR82Q96P67 336 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 PFDN5Q99471 154 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 MFFQ9GZY8 342 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 TUBA4BQ9H853 241 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 SRD5A3Q9H8P0 318 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 DNAH9Q9NYC9 4486 aa7.38□□□□□ -1.23
TPM4-216ENST00000592822 ZNF688P0C7X2 276 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
TPM4-216ENST00000592822 DEFB131AP59861 70 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 FFAR4Q5NUL3 377 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 RPL7L1Q6DKI1 246 aaKnown RBP7.37□□□□□ -1.23
TPM4-216ENST00000592822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 KCNRGQ8N5I3 272 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 CYTL1Q9NRR1 136 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 RNF24Q9Y225 148 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
TPM4-216ENST00000592822 A0A087X0K7 114 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 CXCL2P19875 107 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 ATP6V0CP27449 155 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 ZNF345Q14585 488 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 AKAP14Q86UN6 197 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 HSD17B11Q8NBQ5 300 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 ASCL2Q99929 193 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 SH3BGRL3Q9H299 93 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 SEPSECSQ9HD40 501 aaKnown RBP7.36□□□□□ -1.23
TPM4-216ENST00000592822 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
TPM4-216ENST00000592822 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 BORCS7-ASMTA0A0B4J1R7 106 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 TRAV8-2A0A0B4J237 113 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 H3BQ15 152 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 ISLRO14498 428 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 TAAR5O14804 337 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 SNRPCP09234 159 aaKnown RBP7.35□□□□□ -1.23
TPM4-216ENST00000592822 IGLC2P0DOY2 106 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
TPM4-216ENST00000592822 PSMB3P49720 205 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 MEOX2P50222 304 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 CD300CQ08708 224 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 PSMG4Q5JS54 123 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 IGFL4Q6B9Z1 124 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
TPM4-216ENST00000592822 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 FUT9Q9Y231 359 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 AGRNO00468 2067 aa7.35□□□□□ -1.23
TPM4-216ENST00000592822 LOC102724200A0A096LPH7 203 aaPredicted RBP7.34□□□□□ -1.23
TPM4-216ENST00000592822 A0A0D9SG52 128 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 KNCNA6PVL3 124 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 H3BTX0 84 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 C1QBP02746 253 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 ID1P41134 155 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 DEFB1P60022 68 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 RAB2AP61019 212 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
TPM4-216ENST00000592822 HAGHQ16775 308 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 SAMD13Q5VXD3 122 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 OR2G3Q8NGZ4 309 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 LINC00052Q96N35 136 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 MRPL32Q9BYC8 188 aaKnown RBP7.34□□□□□ -1.23
TPM4-216ENST00000592822 HRH4Q9H3N8 390 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 TMEM14CQ9P0S9 112 aa7.34□□□□□ -1.23
TPM4-216ENST00000592822 TENM3Q9P273 2699 aa7.33□□□□□ -1.24
TPM4-216ENST00000592822 EIF3GO75821 320 aaKnown RBP eCLIP7.33□□□□□ -1.24
TPM4-216ENST00000592822 JTBO76095 146 aa7.33□□□□□ -1.24
TPM4-216ENST00000592822 PYYP10082 97 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms