RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-216ENST00000591545 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 CD28P10747 220 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 HGFACQ04756 655 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 TMEM95Q3KNT9 176 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 RPRMLQ8N4K4 120 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 SLC25A39Q9BZJ4 359 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 MLNRO43193 412 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 IGF2-ASQ6U949 168 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 RPP25LQ8N5L8 163 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 MBNL3Q9NUK0 354 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 PSPNO60542 156 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 PLEKHB2Q96CS7 222 aa10.88□□□□□ -0.67
SMARCA4-216ENST00000591545 DLEU1O43261 78 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 C5orf64Q2M2E5 130 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 TCRAP04437 139 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 KLHL30-AS1Q8NEE0 82 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 ANAPC13Q9BS18 74 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 C11orf68Q9H3H3 251 aaKnown RBP10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 ERG28Q9UKR5 140 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 IGKV1-5P01602 117 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 CR1LQ2VPA4 569 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 MGST2Q99735 147 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 PCNX2A6NKB5 2137 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 C15orf32Q32M92 178 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
SMARCA4-216ENST00000591545 SCN8AQ9UQD0 1980 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 BUB1B-PAK6H3BSN5 160 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 IGKV1-27A0A075B6S5 117 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 SAA4P35542 130 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 QRFPP83859 136 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 J3QLI3 93 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 CFPP27918 469 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 MALP21145 153 aa10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 PNRC2Q9NPJ4 139 aaKnown RBP10.86□□□□□ -0.67
SMARCA4-216ENST00000591545 GFI1BQ5VTD9 330 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 C9orf139Q6ZV77 190 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 FREM3P0C091 2139 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 GGTLC3B5MD39 225 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 MAPK1IP1LQ8NDC0 245 aa10.85□□□□□ -0.67
SMARCA4-216ENST00000591545 M0R2P5 195 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 WISP1O95388 367 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 OR10W1Q8NGF6 305 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 UBE2E1P51965 193 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 PSG1P11464 419 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 GLMPQ8WWB7 406 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 EVI2AP22794 236 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
SMARCA4-216ENST00000591545 PLXNA2O75051 1894 aa10.83□□□□□ -0.67
SMARCA4-216ENST00000591545 NOTCH4Q99466 2003 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 TRBV7-1A0A0A6YYK4 115 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 D6R8Y8 96 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 KLF17Q5JT82 389 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 SRSF8Q9BRL6 282 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 PLXNA4Q9HCM2 1894 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF138P52744 262 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 FAM208BQ5VWN6 2430 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 ASCL4Q6XD76 172 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 GBF1Q92538 1859 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 PMS2P5A8MQ11 134 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
SMARCA4-216ENST00000591545 IGHV1-69DA0A0B4J2H0 117 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 IGHV1-69P01742 117 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 CD300EQ496F6 205 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF329Q86UD4 541 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 OVOL2Q9BRP0 275 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 FAM215AQ9Y5M1 114 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 NDUFS6O75380 124 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 CRPP02741 224 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 BCL6BQ8N143 479 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms