RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 BPIFCQ8NFQ6 507 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 OR10P1Q8NGE3 313 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 C17orf77Q96MU5 243 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 SMCO3A2RU48 225 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 C5orf51A6NDU8 294 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 ZNF98A6NK75 572 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 DEDDO75618 318 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 RRAS2P62070 204 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-211ENST00000590499 SNRPD3P62318 126 aaKnown RBP8.18□□□□□ -1.1
SMAD4-211ENST00000590499 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMAD4-211ENST00000590499 GSG1LQ6UXU4 331 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 STHQ8IWL8 128 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 IL17DQ8TAD2 202 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 GATAD1Q8WUU5 269 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 MARVELD1Q9BSK0 173 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 NPVFQ9HCQ7 196 aa8.18□□□□□ -1.1
SMAD4-211ENST00000590499 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
SMAD4-211ENST00000590499 A0A0J9YWU9 116 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 CA1P00915 261 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-211ENST00000590499 SPP1P10451 314 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 ORM2P19652 201 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 C4BPBP20851 252 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 SELENOTP62341 195 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 ACTL10Q5JWF8 245 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 TEPPQ6URK8 271 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 PPP1R14BQ96C90 147 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 MGAT4CQ9UBM8 478 aa8.17□□□□□ -1.1
SMAD4-211ENST00000590499 FAM24AA6NFZ4 105 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 INMT-MINDY4F8WBC2 141 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 H3BMM0 161 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 H3BRN7 92 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 L7N2F9 121 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 PRAF2O60831 178 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 LINC00869P0C866 280 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 PSMB3P49720 205 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 VAMP2P63027 116 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 SLC38A11Q08AI6 406 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 RAB32Q13637 225 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 MORN3Q6PF18 240 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-211ENST00000590499 OR1B1Q8NGR6 318 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 SHANK2-AS3Q9BTD1 123 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 TMEM147Q9BVK8 224 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 SCRT1Q9BWW7 348 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 SLC25A39Q9BZJ4 359 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-211ENST00000590499 GPN1Q9HCN4 374 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-211ENST00000590499 LYRM2Q9NU23 88 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-211ENST00000590499 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
SMAD4-211ENST00000590499 IGSF23A1L1A6 192 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 ISLRO14498 428 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 HYPMO75409 117 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 CST7O76096 145 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 CAV2P51636 162 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 DEFB1P60022 68 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 S100A10P60903 97 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 VWC2Q2TAL6 325 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 TMEM41BQ5BJD5 291 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 CSNK1G2-AS1Q8NCQ2 148 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 OR11H2Q8NH07 326 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 MGST2Q99735 147 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 RARRES2Q99969 163 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 C11orf68Q9H3H3 251 aaKnown RBP8.15□□□□□ -1.1
SMAD4-211ENST00000590499 SLC25A22Q9H936 323 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 DOK5Q9P104 306 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 HIGD1AQ9Y241 93 aa8.15□□□□□ -1.1
SMAD4-211ENST00000590499 GOSR2O14653 212 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 AGPAT2O15120 278 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 SIX6O95475 246 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 PVALBP20472 110 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-211ENST00000590499 S100A7P31151 101 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 ID1P41134 155 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 GALR1P47211 349 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 MEOX2P50222 304 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 SULT1A1P50225 295 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 BCAP31P51572 246 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 DEFA1P59665 94 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 DEFA3P59666 94 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 SAMD13Q5VXD3 122 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 ZNF546Q86UE3 836 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 TMEM252Q8N6L7 170 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 TMEM217Q8N7C4 229 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 GPR82Q96P67 336 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 UHRF2Q96PU4 802 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 NMES1Q9C002 83 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 SAV1Q9H4B6 383 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-211ENST00000590499 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
SMAD4-211ENST00000590499 LCE6AA0A183 80 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 ZNF705EA8MWA4 302 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-211ENST00000590499 MRPS12O15235 138 aaKnown RBP8.13□□□□□ -1.11
SMAD4-211ENST00000590499 H2BFSP57053 126 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 RAP2BP61225 183 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms