RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 KHDC3LQ587J8 217 aa17.22■□□□□ 0.35
ACTN4-210ENST00000588618 RHPN1-AS1Q9BWJ2 59 aa17.22■□□□□ 0.35
ACTN4-210ENST00000588618 TRAV5A0A0B4J249 113 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 BUB3O43684 328 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 CBLN1P23435 193 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 SMPXQ9UHP9 88 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 TEX46H3BTG2 121 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 OR7C2O60412 319 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 H2AFB1P0C5Y9 115 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 FOLR2P14207 255 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 SFT2D1Q8WV19 159 aa17.21■□□□□ 0.35
ACTN4-210ENST00000588618 RAB14P61106 215 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 BLOC1S1P78537 153 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 C1orf194Q5T5A4 169 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 LCN15Q6UWW0 184 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 BPIFA4PQ86YQ2 179 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 LINC00482Q8N8I6 264 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 STXBP6Q8NFX7 210 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 U3KQE9 123 aa17.2■□□□□ 0.34
ACTN4-210ENST00000588618 MAP1LC3B2A6NCE7 125 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 NMBP08949 121 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 RPL7P18124 248 aaKnown RBP17.19■□□□□ 0.34
ACTN4-210ENST00000588618 DYNLRB2Q8TF09 96 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 SAT2Q96F10 170 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-210ENST00000588618 FAM167A-AS1Q96KT0 104 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 GPR82Q96P67 336 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 MAP1LC3BQ9GZQ8 125 aa17.19■□□□□ 0.34
ACTN4-210ENST00000588618 CHEK1O14757 476 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 PQLC2Q6ZP29 291 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 IQCF2Q8IXL9 164 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 SLC25A2Q9BXI2 301 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 CXorf1O96002 111 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 STAG3L2P0CL84 134 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 STAG3L3P0CL85 134 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 ZNF503Q96F45 646 aa17.18■□□□□ 0.34
ACTN4-210ENST00000588618 CD33P20138 364 aa17.17■□□□□ 0.34
ACTN4-210ENST00000588618 GALR1P47211 349 aa17.17■□□□□ 0.34
ACTN4-210ENST00000588618 RPL11P62913 178 aaKnown RBP17.17■□□□□ 0.34
ACTN4-210ENST00000588618 OR51M1Q9H341 326 aa17.17■□□□□ 0.34
ACTN4-210ENST00000588618 CMYA5Q8N3K9 4069 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 A0A1B0GV50 99 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 SAP30O75446 220 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 HBE1P02100 147 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 CSN3P07498 182 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 ARL14EPLP0DKL9 152 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 FGF8P55075 233 aaPredicted RBP17.16■□□□□ 0.34
ACTN4-210ENST00000588618 C16orf54Q6UWD8 224 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 SIGLEC15Q6ZMC9 328 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 ADAMTSL5Q6ZMM2 481 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 MBD3L1Q8WWY6 194 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 PAXXQ9BUH6 204 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 HELTA6NFD8 242 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 IL34Q6ZMJ4 242 aa17.16■□□□□ 0.34
ACTN4-210ENST00000588618 CD5P06127 495 aa17.15■□□□□ 0.34
ACTN4-210ENST00000588618 ATF4P18848 351 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-210ENST00000588618 UBE2L3P68036 154 aaKnown RBP17.15■□□□□ 0.34
ACTN4-210ENST00000588618 SELENOKQ9Y6D0 94 aa17.15■□□□□ 0.34
ACTN4-210ENST00000588618 OR10J4P0C629 311 aa17.14■□□□□ 0.33
ACTN4-210ENST00000588618 SPATA3Q8NHX4 192 aa17.14■□□□□ 0.33
ACTN4-210ENST00000588618 GLMPQ8WWB7 406 aa17.14■□□□□ 0.33
ACTN4-210ENST00000588618 SIGLEC8Q9NYZ4 499 aa17.14■□□□□ 0.33
ACTN4-210ENST00000588618 TMEM14CQ9P0S9 112 aa17.14■□□□□ 0.33
ACTN4-210ENST00000588618 ZNF785A8K8V0 405 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 MRPS12O15235 138 aaKnown RBP17.13■□□□□ 0.33
ACTN4-210ENST00000588618 PYYP10082 97 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 CCL20P78556 96 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 TCF24Q7RTU0 167 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 HRH4Q9H3N8 390 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 TMPRSS5Q9H3S3 457 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 MLXQ9UH92 298 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 GP9P14770 177 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 LYPD6BQ8NI32 183 aa17.13■□□□□ 0.33
ACTN4-210ENST00000588618 MCRIP2Q9BUT9 160 aaKnown RBP17.13■□□□□ 0.33
ACTN4-210ENST00000588618 SNRPCP09234 159 aaKnown RBP17.12■□□□□ 0.33
ACTN4-210ENST00000588618 GCHFRP30047 84 aa17.12■□□□□ 0.33
ACTN4-210ENST00000588618 CLLU1Q5K131 121 aa17.12■□□□□ 0.33
ACTN4-210ENST00000588618 RBPMS2Q6ZRY4 209 aaKnown RBP17.12■□□□□ 0.33
ACTN4-210ENST00000588618 TMEM167BQ9NRX6 74 aa17.12■□□□□ 0.33
ACTN4-210ENST00000588618 IGKV3-7A0A075B6H7 116 aa17.11■□□□□ 0.33
ACTN4-210ENST00000588618 C17orf77Q96MU5 243 aa17.11■□□□□ 0.33
ACTN4-210ENST00000588618 TRAV1-1A0A0B4J248 108 aa17.1■□□□□ 0.33
ACTN4-210ENST00000588618 HIST1H1EP10412 219 aaKnown RBP17.1■□□□□ 0.33
ACTN4-210ENST00000588618 BLNKQ8WV28 456 aa17.1■□□□□ 0.33
ACTN4-210ENST00000588618 SMAD5-AS1Q9Y6J3 95 aa17.1■□□□□ 0.33
ACTN4-210ENST00000588618 PSMB3P49720 205 aa17.1■□□□□ 0.33
ACTN4-210ENST00000588618 MEOX2P50222 304 aa17.1■□□□□ 0.33
ACTN4-210ENST00000588618 NBEAP1P0C6P0 100 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 PAFAH1B2P68402 229 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 GUK1Q16774 197 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 DEFB114Q30KQ6 69 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 KRTAP21-3Q3LHN1 58 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 C9orf66Q5T8R8 295 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 FXYD5Q96DB9 178 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 PKD1L1Q8TDX9 2849 aa17.09■□□□□ 0.33
ACTN4-210ENST00000588618 NOTCH3Q9UM47 2321 aa17.08■□□□□ 0.33
ACTN4-210ENST00000588618 H3BQ15 152 aa17.08■□□□□ 0.32
ACTN4-210ENST00000588618 IGLC2P0DOY2 106 aa17.08■□□□□ 0.32
ACTN4-210ENST00000588618 INSL3P51460 131 aa17.08■□□□□ 0.32
ACTN4-210ENST00000588618 WFDC9Q8NEX5 89 aa17.08■□□□□ 0.32
ACTN4-210ENST00000588618 NRN1Q9NPD7 142 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms