RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 MINOS1-NBL1R4GNA1 71 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 AARDQ4LEZ3 155 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 RNF5Q99942 180 aa9.88□□□□□ -0.83
SMARCA4-208ENST00000585799 RPL7P18124 248 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 LCNL1Q6ZST4 164 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 TMEM183AQ8IXX5 376 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 HIST3H2BBQ8N257 126 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 A0A087X0M5 115 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 A0A1B0GX30 115 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 TNFRSF13BO14836 293 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 TAS2R60P59551 318 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 NDPQ00604 133 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 DTX2Q86UW9 622 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 TEX22C9J3V5 150 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 SMAD7O15105 426 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 UBE2E1P51965 193 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 OR11H6Q8NGC7 330 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 ATG101Q9BSB4 218 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 ACANP16112 2415 aa9.87□□□□□ -0.83
SMARCA4-208ENST00000585799 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 HIST1H2BLQ99880 126 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 RNF24Q9Y225 148 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 FXYD5Q96DB9 178 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 IGHV4-30-2A0A087WSY4 118 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 TCRAP04437 139 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 PYY3Q5JQD4 70 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 PVRIGQ6DKI7 326 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 TMEM116Q8NCL8 245 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 FAM167A-AS1Q96KT0 104 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 METTL26Q96S19 204 aa9.86□□□□□ -0.83
SMARCA4-208ENST00000585799 IGKV1D-37A0A075B6S9 117 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 C9JCJ5 164 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 CD99P14209 185 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 Q8TAT8 98 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 CDC42EP3Q9UKI2 254 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 SERF1AO75920 110 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 IQCJQ1A5X6 159 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 EEF1AKMT3Q96AZ1 226 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 TBX15Q96SF7 602 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 RAB4AP20338 218 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 C11orf71Q6IPW1 123 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 C16orf92Q96LL3 132 aa9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 SOX21Q9Y651 276 aaPredicted RBP9.85□□□□□ -0.83
SMARCA4-208ENST00000585799 K7EIM0 57 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 AMBPP02760 352 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 SRD5A1P18405 259 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 THAP8Q8NA92 274 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 PAM16Q9Y3D7 125 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 FOXL1Q12952 345 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 SP5Q6BEB4 398 aaPredicted RBP9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 OTORQ9NRC9 128 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 GSN-AS1Q9NRJ2 163 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 PSG8Q9UQ74 426 aa9.84□□□□□ -0.83
SMARCA4-208ENST00000585799 HLA-DQA1P01909 254 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 IGHV4-38-2P0DP08 117 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 LRBAP50851 2863 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM189A5PLL7 270 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 OOSP1A8MZH6 123 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 M0R2Z0 102 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 PPIFP30405 207 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 I3L2K1 104 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 LMO4P61968 165 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 CDPF1Q6NVV7 123 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 GRAMD2BQ96HH9 432 aa9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 RPP21Q9H633 154 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-208ENST00000585799 S100A4P26447 101 aaKnown RBP9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 ARL2-SNX15V9GYD0 113 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 DSCAML1Q8TD84 2053 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 KALRNO60229 2985 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 IGHV7-81A0A0B4J1V7 117 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 ZNF491Q8N8L2 437 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 PRSS3P2Q8NHM4 247 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 TBL2Q9Y4P3 447 aaKnown RBP9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 CENPVL3A0A0U1RRI6 287 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 GCGP01275 180 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 MT-ND6P03923 174 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 HLA-DMBP28068 263 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 ARL3P36405 182 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms