RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGLL1P15814 213 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CD24P25063 80 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 COL8A1P27658 744 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 B9A039 149 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CLEC5AQ9NY25 188 aa11.27□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ZZEF1O43149 2961 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 M0QZ24 198 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 NDUFB8O95169 186 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 IGKV1-17P01599 117 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PPBPP02775 128 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 Q5PR19 223 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RPEQ96AT9 228 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RNF5Q99942 180 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 C1RLQ9NZP8 487 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ABCA1O95477 2261 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TRBV6-1A0A0K0K1D8 114 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RBP4P02753 201 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
CDK5RAP3-237ENST00000585163 HAX1O00165 279 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SRSF8Q9BRL6 282 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ACACAQ13085 2346 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LY6LH3BQJ8 138 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 OVOL3O00110 214 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CHEK1O14757 476 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 COX7A1P24310 79 aa11.25□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PPIAL4CA0A0B4J2A2 164 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PPIAL4GP0DN37 164 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 OR4F17Q8NGA8 305 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TRBV19A0A075B6N1 114 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PLGLAQ15195 96 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
CDK5RAP3-237ENST00000585163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 K7EIM0 57 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SIAH2O43255 324 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TCF21O43680 179 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TOX4O94842 621 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CD3EP07766 207 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 POLEQ07864 2286 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
CDK5RAP3-237ENST00000585163 APC2O95996 2303 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 H3BRN7 92 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 K7EP13 123 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 CNIH1O95406 144 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 OR5AL1P0C617 328 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 MUC15Q8N387 334 aa11.22□□□□□ -0.61
CDK5RAP3-237ENST00000585163 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
CDK5RAP3-237ENST00000585163 TIMM23O14925 209 aa11.21□□□□□ -0.61
CDK5RAP3-237ENST00000585163 LIPFP07098 398 aa11.21□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.61
CDK5RAP3-237ENST00000585163 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
CDK5RAP3-237ENST00000585163 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CBY3A6NI87 242 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 K7EQM0 130 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TCF15Q12870 199 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PRSS57Q6UWY2 283 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 GATD1Q8NB37 220 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
CDK5RAP3-237ENST00000585163 GVINP1Q7Z2Y8 2422 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms