RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IGKV2-40A0A087WW87 121 aaPredicted RBP8.13□□□□□ -1.11
RFFL-212ENST00000584655 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 M0QZ24 198 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 IGKV2D-40P01614 121 aaPredicted RBP8.13□□□□□ -1.11
RFFL-212ENST00000584655 BPIFB3P59826 476 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 C3orf36Q3SXR2 165 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TCTEX1D1Q8N7M0 179 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 HIGD1AQ9Y241 93 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 STAG3L2P0CL84 134 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 STAG3L3P0CL85 134 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 CR1LQ2VPA4 569 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 FBXL19-AS1Q494R0 122 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 BTF3L4Q96K17 158 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 IGHV2-70DA0A0C4DH43 119 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 PMCHP20382 165 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 OR4A5Q8NH83 315 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 C21orf62Q9NYP8 219 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 EDN2P20800 178 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 FXYD7P58549 80 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 NEU1Q99519 415 aa8.12□□□□□ -1.11
RFFL-212ENST00000584655 SERTM2A0A1B0GWG4 89 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 HIST1H1BP16401 226 aaKnown RBP8.11□□□□□ -1.11
RFFL-212ENST00000584655 PKIAP61925 76 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 TNFRSF14Q92956 283 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 TMEM18Q96B42 140 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 RABAC1Q9UI14 185 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 A0A1B0GWJ7 208 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
RFFL-212ENST00000584655 C2orf83Q53S99 150 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 Q5PR19 223 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 ERASQ7Z444 233 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 ATOH7Q8N100 152 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 DAZAP1Q96EP5 407 aaKnown RBP8.11□□□□□ -1.11
RFFL-212ENST00000584655 NAT8BQ9UHF3 227 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 F11RQ9Y624 299 aaKnown RBP8.11□□□□□ -1.11
RFFL-212ENST00000584655 TCRBV4S1A1TA0A5B7 111 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 TEX22C9J3V5 150 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
RFFL-212ENST00000584655 FOLR2P14207 255 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 LINC01551Q86U37 167 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 PGLYRP4Q96LB8 373 aa8.11□□□□□ -1.11
RFFL-212ENST00000584655 APOHP02749 345 aaPredicted RBP8.1□□□□□ -1.11
RFFL-212ENST00000584655 SRSF1Q07955 248 aaKnown RBP eCLIP8.1□□□□□ -1.11
RFFL-212ENST00000584655 KCNIP4Q6PIL6 250 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 SNURFLB1AK76 121 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 PAX5Q02548 391 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 OR1P1Q8NH06 330 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 CACNG8Q8WXS5 425 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 MCRIP2Q9BUT9 160 aaKnown RBP8.1□□□□□ -1.11
RFFL-212ENST00000584655 PITPNC1Q9UKF7 332 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
RFFL-212ENST00000584655 IGKV1-17P01599 117 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 SRP14P37108 136 aaKnown RBP8.1□□□□□ -1.11
RFFL-212ENST00000584655 CNN1P51911 297 aaKnown RBP8.1□□□□□ -1.11
RFFL-212ENST00000584655 ERCC8Q13216 396 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 DEFB112Q30KQ8 113 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 CCDC144NLQ6NUI1 221 aa8.1□□□□□ -1.11
RFFL-212ENST00000584655 IGKV1D-37A0A075B6S9 117 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 IGHV7-81A0A0B4J1V7 117 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 K7EN84 100 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 AMBPP02760 352 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 MSMBP08118 114 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 DTX2Q86UW9 622 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 RNF125Q96EQ8 232 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 SFRP2Q96HF1 295 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 SLC25A2Q9BXI2 301 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 Q9H3A6 140 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 PRSS46E5RG02 174 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 TMEM256Q8N2U0 113 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 TEX45Q8NA69 505 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 MANBALQ9NQG1 85 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 STXBP6Q8NFX7 210 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.11
RFFL-212ENST00000584655 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
RFFL-212ENST00000584655 LOC102724200A0A096LPH7 203 aaPredicted RBP8.08□□□□□ -1.12
RFFL-212ENST00000584655 F2Z2F3 143 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 F6UB75 175 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 EREGO14944 169 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PLA2G2AP14555 144 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 ZNF138P52744 262 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 K7EIM0 57 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 MPDU1O75352 247 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PRR20EP86478 221 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PRR20CP86479 221 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PRR20DP86480 221 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PRR20BP86481 221 aa8.08□□□□□ -1.12
RFFL-212ENST00000584655 PRR20AP86496 221 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms