RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PRR20BP86481 221 aa15.22■□□□□ 0.03
SRSF1-206ENST00000583741 PRR20AP86496 221 aa15.22■□□□□ 0.03
SRSF1-206ENST00000583741 AKR1C8PQ5T2L2 129 aa15.22■□□□□ 0.03
SRSF1-206ENST00000583741 SLC39A9Q9NUM3 307 aa15.22■□□□□ 0.03
SRSF1-206ENST00000583741 PLA2G2EQ9NZK7 142 aa15.22■□□□□ 0.03
SRSF1-206ENST00000583741 ZNF320A2RRD8 509 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 TGOLN2O43493 480 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 CLEC3BP05452 202 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 CTSGP08311 255 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 LINC00869P0C866 280 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 GATA2P23769 480 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-206ENST00000583741 SULT1A2P50226 295 aa15.21■□□□□ 0.03
SRSF1-206ENST00000583741 NUPR2A6NF83 97 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 MBP02144 154 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 YPEL3P61236 119 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-206ENST00000583741 RNF141Q8WVD5 230 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 CHRDL1Q9BU40 450 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 YIF1AO95070 293 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 TOMM40O96008 361 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 RD3LP0DJH9 198 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 PSG1P11464 419 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 ADMP35318 185 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 RAB5CP51148 216 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 ACOT6Q3I5F7 207 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-206ENST00000583741 TM4SF20Q53R12 229 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 TMEM41BQ5BJD5 291 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 SPSB3Q6PJ21 355 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 Q6ZRG5 221 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 RPP25LQ8N5L8 163 aaKnown RBP15.2■□□□□ 0.02
SRSF1-206ENST00000583741 VSIRQ9H7M9 311 aa15.2■□□□□ 0.02
SRSF1-206ENST00000583741 HECTD4Q9Y4D8 3996 aa15.19■□□□□ 0.02
SRSF1-206ENST00000583741 RAB2AP61019 212 aa15.19■□□□□ 0.02
SRSF1-206ENST00000583741 KIAA1109Q2LD37 5005 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 M6PRP20645 277 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 FAM106AQ4KMX7 169 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 CEMP1Q6PRD7 247 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-206ENST00000583741 UNQ9165/PRO28630Q6UXU0 137 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 WFDC3Q8IUB2 231 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 LRRC20Q8TCA0 184 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 RPRMQ9NS64 109 aa15.18■□□□□ 0.02
SRSF1-206ENST00000583741 ZNF705EA8MWA4 302 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-206ENST00000583741 GCSAMLQ5JQS6 135 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 DPPA3Q6W0C5 159 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 ZNF600Q6ZNG1 722 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 OR51G1Q8NGK1 321 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 OR10G4Q8NGN3 311 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 OR10G9Q8NGN4 311 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 OR10G7Q8NGN6 311 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 FAM213BQ8TBF2 198 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 Q8WTZ3 238 aa15.17■□□□□ 0.02
SRSF1-206ENST00000583741 FHITP49789 147 aa15.16■□□□□ 0.02
SRSF1-206ENST00000583741 RAB14P61106 215 aa15.16■□□□□ 0.02
SRSF1-206ENST00000583741 RELQ04864 619 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-206ENST00000583741 DEFB135Q30KP9 77 aa15.16■□□□□ 0.02
SRSF1-206ENST00000583741 PFDN5Q99471 154 aa15.16■□□□□ 0.02
SRSF1-206ENST00000583741 VPS13DQ5THJ4 4388 aa15.16■□□□□ 0.02
SRSF1-206ENST00000583741 COX7A2P2O60397 106 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 C8orf88P0DMB2 117 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 PLP1P60201 277 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 LYZP61626 148 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 PXDC1Q5TGL8 231 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 Q6ZWC4 215 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 OR1L4Q8NGR5 311 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 PCNPQ8WW12 178 aaKnown RBP15.15■□□□□ 0.02
SRSF1-206ENST00000583741 SAT2Q96F10 170 aaPredicted RBP15.15■□□□□ 0.02
SRSF1-206ENST00000583741 DOK5Q9P104 306 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 TP53TG1Q9Y2A0 90 aa15.15■□□□□ 0.02
SRSF1-206ENST00000583741 PUS1Q9Y606 427 aaKnown RBP eCLIP15.15■□□□□ 0.02
SRSF1-206ENST00000583741 IGHV3-35A0A0C4DH35 117 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 SPRY2O43597 315 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 IL4P05112 153 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 NMBP08949 121 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 ORM2P19652 201 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 BMI1P35226 326 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 FAM122CQ6P4D5 195 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 OR1B1Q8NGR6 318 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 RNF125Q96EQ8 232 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 PBDC1Q9BVG4 233 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 TRAV25A0A0B4J276 109 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 OR5G3P0C626 314 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 BLOC1S1P78537 153 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 RBPMS2Q6ZRY4 209 aaKnown RBP15.14■□□□□ 0.01
SRSF1-206ENST00000583741 GATAD1Q8WUU5 269 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 TMEM37Q8WXS4 190 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 ACTR3CQ9C0K3 210 aaPredicted RBP15.14■□□□□ 0.01
SRSF1-206ENST00000583741 DNAJC4Q9NNZ3 241 aa15.14■□□□□ 0.01
SRSF1-206ENST00000583741 ELOA3CA0A087WX78 387 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-206ENST00000583741 A0A1W2PPV4 95 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 HYPMO75409 117 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 CDC34P49427 236 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-206ENST00000583741 APOC4P55056 127 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 RHOBP62745 196 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 CLLU1Q5K131 121 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 C10orf113Q5VZT2 155 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 ZNF414Q96IQ9 312 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 SLC25A22Q9H936 323 aa15.13■□□□□ 0.01
SRSF1-206ENST00000583741 ZNF726P1Q15940 193 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 FAM78BQ5VT40 261 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 TOMM20LQ6UXN7 152 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 PATE2Q6UY27 113 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms