RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 TRBV6-4A0A1B0GX49 114 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 TLCD2A6NGC4 264 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 CCL25O15444 150 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 PIAS1O75925 651 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 ERC2-IT1O76042 136 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 TRGC2P03986 189 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 IFNA4P05014 189 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 CRHP06850 196 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 ZNF25P17030 456 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 RAB5CP51148 216 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 GNG3P63215 75 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 CDK6Q00534 326 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 ZNF833PQ6ZTB9 187 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 ZNF714Q96N38 554 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 BOLA2Q9H3K6 86 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 MICAL3Q7RTP6 2002 aa0.98□□□□□ -2.25
SMCHD1-209ENST00000583441 CACNA1BQ00975 2339 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 IGLV3-32A0A0A0MS00 114 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 PATE2Q6UY27 113 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 LINC00322Q6ZN03 302 aaPredicted RBP0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 TEN1Q86WV5 123 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 OR4K15Q8NH41 348 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 MUCL1Q96DR8 90 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 LINC00052Q96N35 136 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 GPX7Q96SL4 187 aaPredicted RBP0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 RTL8AQ9BWD3 113 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 CACYBPQ9HB71 228 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 BIN3Q9NQY0 253 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 OR52A1Q9UKL2 312 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 DOCK3Q8IZD9 2030 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 PLXND1Q9Y4D7 1925 aa0.97□□□□□ -2.25
SMCHD1-209ENST00000583441 TECTAO75443 2155 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 DENND4CQ5VZ89 1909 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 TRAV27A0A087WT01 109 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 TMEM238C9JI98 176 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 M0R233 179 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 TMBIM6P55061 237 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 PSG9Q00887 426 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 SNCBQ16143 134 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 GRINAQ7Z429 371 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 STX19Q8N4C7 294 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 CHCHD1Q96BP2 118 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 PLEKHB2Q96CS7 222 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 ZHX1-C8orf76Q96EF9 292 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 AMELYQ99218 206 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 MAP1LC3BQ9GZQ8 125 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 TAS2R7Q9NYW3 318 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 SS18L2Q9UHA2 77 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 UFC1Q9Y3C8 167 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 ROCK1Q13464 1354 aa0.96□□□□□ -2.26
SMCHD1-209ENST00000583441 ARHGEF11O15085 1522 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 MFSD11O43934 449 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 HIST1H2BKO60814 126 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 DNAL4O96015 105 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 HIST1H2BJP06899 126 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 CXCL8P10145 99 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 INSL3P51460 131 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 TAS2R41P59536 307 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 C1orf140Q5VVS0 124 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 KRTAP26-1Q6PEX3 210 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 CROCCP2Q86T23 111 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 POP5Q969H6 163 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 GID8Q9NWU2 228 aa0.95□□□□□ -2.26
SMCHD1-209ENST00000583441 POLEQ07864 2286 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 OR2T8A6NH00 312 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 PPP5D1E7EU14 171 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 F8W1H4 67 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 H3BRM9 83 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 GPR31O00270 319 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 LYRM1O43325 122 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 COX7CP15954 63 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 ARPP19P56211 112 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 KLRD1Q13241 179 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 C1orf134Q5TEV5 83 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 TRIQKQ629K1 86 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 C3orf33Q6P1S2 294 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 OR5AS1Q8N127 324 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 SMIM20Q8N5G0 67 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 OR10AG1Q8NH19 301 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 RAB37Q96AX2 223 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 HYLS1Q96M11 299 aa0.94□□□□□ -2.26
SMCHD1-209ENST00000583441 NCAPD3P42695 1498 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 CEP164Q9UPV0 1460 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 OBSL1O75147 1896 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 YTHDC2Q9H6S0 1430 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 RER1O15258 196 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 PFDN1O60925 122 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 CD2P06729 351 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 CXCL1P09341 107 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 NEFHP12036 1026 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 IDO1P14902 403 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 SERPINB1P30740 379 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 VBP1P61758 197 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 RTL8BQ17RB0 113 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 PHF5AQ7RTV0 110 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 ARPINQ7Z6K5 226 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 GKN2Q86XP6 184 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 FAM24BQ8N5W8 94 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 PLPP5Q8NEB5 264 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms