RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 COMMD6Q7Z4G1 85 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 GPHB5Q86YW7 130 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 AMN1Q8IY45 258 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 SIGLECL1Q8N7X8 197 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 FAM213BQ8TBF2 198 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 DSCR8Q96T75 97 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 MGST2Q99735 147 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 CHAC1Q9BUX1 264 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 PARP12Q9H0J9 701 aaKnown RBP4.85□□□□□ -1.63
COPS3-216ENST00000579716 ZNF492Q9P255 531 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 F11RQ9Y624 299 aaKnown RBP4.85□□□□□ -1.63
COPS3-216ENST00000579716 ABCC6O95255 1503 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 ABCC1P33527 1531 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.85□□□□□ -1.63
COPS3-216ENST00000579716 TNRC6AQ8NDV7 1962 aaKnown RBP4.84□□□□□ -1.63
COPS3-216ENST00000579716 ANK1P16157 1881 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 MAP3K4Q9Y6R4 1608 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 C1orf167Q5SNV9 1468 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 RALGAPBQ86X10 1494 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 UMAD1C9J7I0 102 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 H3BUT2 72 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 IGKCP01834 107 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 INAFM2P0DMQ5 153 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 FAUP35544 74 aaKnown RBP4.84□□□□□ -1.63
COPS3-216ENST00000579716 ETDBQ3ZM63 59 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 ZNF876PQ49A33 203 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 C7orf65Q6ZTY9 151 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 MARCH3Q86UD3 253 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 SBSPONQ8IVN8 264 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 FLVCR1-AS1Q8TAF5 88 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 URB1-AS1Q96HZ7 61 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 AMELYQ99218 206 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 EPDR1Q9UM22 224 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 ZNF835Q9Y2P0 537 aa4.84□□□□□ -1.63
COPS3-216ENST00000579716 CACNA1IQ9P0X4 2223 aa4.84□□□□□ -1.64
COPS3-216ENST00000579716 COL24A1Q17RW2 1714 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 ABCA5Q8WWZ7 1642 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
COPS3-216ENST00000579716 IGHV7-81A0A0B4J1V7 117 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 UBE2L5PA0A1B0GUS4 154 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 BUB1B-PAK6H3BSN5 160 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 K7ERJ3 54 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 SDCBPO00560 298 aaPredicted RBP4.83□□□□□ -1.64
COPS3-216ENST00000579716 OR1I1O60431 355 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 TCL1BO95988 128 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 PRM2P04554 102 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 CD7P09564 240 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 UBE2L3P68036 154 aaKnown RBP4.83□□□□□ -1.64
COPS3-216ENST00000579716 ZNF79Q15937 498 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 FAM78AQ5JUQ0 283 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 C12orf73Q69YU5 71 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 GUSBP11Q6P575 273 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 CMTM2Q8TAZ6 248 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 TSKUQ8WUA8 353 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 LINC00479Q96M42 142 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 OPRPNQ99935 248 aaPredicted RBP4.83□□□□□ -1.64
COPS3-216ENST00000579716 DPH3P1Q9H4G8 78 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 TAC3Q9UHF0 121 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 KLK5Q9Y337 293 aaPredicted RBP4.83□□□□□ -1.64
COPS3-216ENST00000579716 LINC00588Q9Y4M8 146 aa4.83□□□□□ -1.64
COPS3-216ENST00000579716 GLI2P10070 1586 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 MEGF6O75095 1541 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 EHBP1L1Q8N3D4 1523 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 DLC1Q96QB1 1528 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 KIAA0586Q9BVV6 1533 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 COL1A1P02452 1464 aaPredicted RBP4.82□□□□□ -1.64
COPS3-216ENST00000579716 IGHV1-45A0A0A0MS14 117 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 TRAV19A0A0A6YYK7 116 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 KLF18A0A0U1RQI7 1052 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 C9JCJ5 164 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 INS-IGF2F8WCM5 200 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 ZNF253O75346 499 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 TSHBP01222 138 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 ZNF883P0CG24 379 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 COL8A2P25067 703 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 CCL14Q16627 93 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 FAM72BQ86X60 149 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 C10orf105Q8TEF2 133 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 ZNF714Q96N38 554 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 PGLYRP2Q96PD5 576 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 IL36BQ9NZH7 164 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 ITSN1Q15811 1721 aa4.82□□□□□ -1.64
COPS3-216ENST00000579716 C10orf71Q711Q0 1435 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 IGHV3-38A0A0C4DH36 116 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 IGKV1-9A0A0C4DH69 117 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 NAP1L6A6NFF2 107 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 SNRPGP15A8MWD9 76 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 C19orf84I3L1E1 186 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 K7EQG2 157 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 ZNF737O75373 536 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 SSR2P43308 183 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 UBE2AP49459 152 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 LINC00205P59089 165 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
COPS3-216ENST00000579716 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 CXCL17Q6UXB2 119 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 TMEM252Q8N6L7 170 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms