RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 IGHV3-23P01764 117 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 MT-ND6P03923 174 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 AKR1D1P51857 326 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 TPPP2P59282 170 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
SKA2-204ENST00000578519 SLC35B1P78383 322 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 USF2Q15853 346 aaPredicted RBP8.67□□□□□ -1.02
SKA2-204ENST00000578519 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 ZNF414Q96IQ9 312 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 Q96MF0 132 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 PRSS22Q9GZN4 317 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 AURKAIP1Q9NWT8 199 aaPredicted RBP8.67□□□□□ -1.02
SKA2-204ENST00000578519 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
SKA2-204ENST00000578519 K7EN84 100 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 UBE2CO00762 179 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 AMY1AP04745 511 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 COL8A1P27658 744 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 BMI1P35226 326 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 ARL3P36405 182 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 IER3P46695 156 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 NDUFA6P56556 154 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 RASL11AQ6T310 242 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 V9GYV3 84 aa8.66□□□□□ -1.02
SKA2-204ENST00000578519 A0A087X0K7 114 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 A8MWL6 223 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 NDUFA4O00483 81 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 AVPP01185 164 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 LTAP01374 205 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 TRGC1P0CF51 173 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 PF4V1P10720 104 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 PPIFP30405 207 aaKnown RBP8.65□□□□□ -1.02
SKA2-204ENST00000578519 ADMP35318 185 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 GNG5P63218 68 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 FABP9Q0Z7S8 132 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 SCGB2A2Q13296 93 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 OR5I1Q13606 314 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 CT83Q5H943 113 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 Q6YL49 198 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 GOLT1AQ6ZVE7 132 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 NPFFR1Q9GZQ6 430 aa8.65□□□□□ -1.02
SKA2-204ENST00000578519 ZNF331Q9NQX6 463 aaPredicted RBP8.65□□□□□ -1.02
SKA2-204ENST00000578519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
SKA2-204ENST00000578519 TRAV34A0A0B4J273 112 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 IZUMO1RA6ND01 250 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 SH2D7A6NKC9 451 aaPredicted RBP8.64□□□□□ -1.03
SKA2-204ENST00000578519 LINC01548A6NM66 108 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
SKA2-204ENST00000578519 FSHBP01225 129 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 IGLV2-8P01709 118 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 P01737 135 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 CT45A10P0DMU9 189 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 HOXA5P20719 270 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 S100A2P29034 98 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 PSG3Q16557 428 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 SIGLEC15Q6ZMC9 328 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 NDFIP1Q9BT67 221 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
SKA2-204ENST00000578519 SOX21Q9Y651 276 aaPredicted RBP8.64□□□□□ -1.03
SKA2-204ENST00000578519 DOPEY1Q5JWR5 2465 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 SMIM27A0A1W2PRY6 76 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 DIRC3C9JPN6 131 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 SLC17A3O00476 420 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BKO60814 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BJP06899 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BOP23527 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BBP33778 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 CDX1P47902 265 aaPredicted RBP8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BDP58876 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BCP62807 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST2H2BEQ16778 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 ACTL10Q5JWF8 245 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.63□□□□□ -1.03
SKA2-204ENST00000578519 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 PRNTQ86SH4 94 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 EXOC3-AS1Q8N2X6 119 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 GBGT1Q8N5D6 347 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 NUDT10Q8NFP7 164 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 FRZBQ92765 325 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BHQ93079 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 MRPL53Q96EL3 112 aaKnown RBP8.63□□□□□ -1.03
SKA2-204ENST00000578519 NUDT11Q96G61 164 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms