RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 SLURP1P55000 103 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 IL34Q6ZMJ4 242 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
CDK5RAP3-207ENST00000578134 TRAV5A0A0B4J249 113 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 OR7C2O60412 319 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 MEOX2P50222 304 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 C16orf54Q6UWD8 224 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 SSX7Q7RTT5 188 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 SUN5Q8TC36 379 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 SCRT1Q9BWW7 348 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 MED9Q9NWA0 146 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 SIGLEC8Q9NYZ4 499 aa12.92□□□□□ -0.34
CDK5RAP3-207ENST00000578134 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 TMEM213A2RRL7 107 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 HELTA6NFD8 242 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 OVOL1O14753 267 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 GCHFRP30047 84 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 GALR1P47211 349 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 GUK1Q16774 197 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 MORN5Q5VZ52 161 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
CDK5RAP3-207ENST00000578134 CHEK1O14757 476 aa12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 IFNA1P01562 189 aa12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 PF4P02776 101 aa12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 CBLN1P23435 193 aa12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.34
CDK5RAP3-207ENST00000578134 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 FOLR2P14207 255 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 GP9P14770 177 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 MANBALQ9NQG1 85 aa12.89□□□□□ -0.35
CDK5RAP3-207ENST00000578134 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 MRPS12O15235 138 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 PDE6HQ13956 83 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 NDUFA5Q16718 116 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 SAMD13Q5VXD3 122 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 HIST2H2BDQ6DRA6 164 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
CDK5RAP3-207ENST00000578134 A0A087X0K7 114 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 ZNF785A8K8V0 405 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 CSN3P07498 182 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IGLC2P0DOY2 106 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 RIPPLY3P57055 190 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IQCF2Q8IXL9 164 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 SMDT1Q9H4I9 107 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
CDK5RAP3-207ENST00000578134 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 ZNF253O75346 499 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 PYYP10082 97 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 CCL20P78556 96 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IGHV3-49A0A0A0MS15 119 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 A0A1B0GV50 99 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 EIF3GO75821 320 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 OR10J4P0C629 311 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 PSG9Q00887 426 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
CDK5RAP3-207ENST00000578134 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 RBFOX3A6NFN3 312 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 INSL3P51460 131 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 FAM90A2PQ658T7 463 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 OR2K2Q8NGT1 345 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 MCRIP2Q9BUT9 160 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
CDK5RAP3-207ENST00000578134 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms